LOC120565053


Basic Information

Item Value
gene id LOC120565053
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7238071 ~ 7239593 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810376.1
CAGGGTTCCGGGGGACAGGGATGTTCCCTCTCAATAAAGATATTCTCCCTGAGACTACTTTTGCCCCCAGCAAGACCACCGAAAGAATGCTACCATCCACTCTACCATCCCCGCCCACAAGGCTGCAGTCTCTCCCACCCCCGCCCACTAGACCATGGTCGCCCCTGCTGACCTTGACCCACTCTGCCCGCCAGCCATCAGCCCTGCTCTCTGGACCTCAGCCCTCCCACCCGCCAGCCAGACGTCAGTCGCTTGCCGATCCGCCAGCCAGACCTCAGTCCTCTGCTTCCCTGACACCCCTGCTACCTCGGGAACCACTGCACTTTTTCCCAGAAGATGAGGTGGTGCTTGAAGAGGTTGTGTTGGAGGATGTACCGGaagaagataatgacctcttcaaTCAGTTCACACCACAGGAAGAAACCCACTCCCAGGATGAGGGACCTTCAACCTCCACATCTGTGAGATCGGTCACATTCAATGACTTGATCTCAATGCCGCAAAGGGAGAGGGCCATCAGAAAGAGAGTGAAGCCACCATCGTATAACCTAACAAGTGAGCAACACATTGAATAtattcaaacaaaaaaatcatccaGCAAGCATCCAGCCAAGCAAGCCAGCTGGTACCCGGGCAGCAAGCAAccgaaagggaaaaaaaagcagggcAAGAGAAGCAAATCACcttgcaaagtctgcaacaccCACTATGGTGACCCAAATGACCCTAAGGCTACTGAGgaatggttaaaatgtgttcCATGTTCTGCCTGGTTTCATGAGAGCTGTGGTGAAGACAATGGTATCTGTGCTGACGATGGTTTCATTTGCAAAGACTGTGTTTGAAAAGTTTTCACACAAACATATCAGTTAATAATTTGGAATGtgaatttttgtatttttgtgaatgcacATTTTGTTCTAAATGtgttgttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccactgacaGTTCACTGATCTATGCTGTTCcaaaatggatttttttaattgcacatttgAATATGTGGGTTTGcacccaaaatgttttttgaatgGCACATATGAATTTTTGTTTAATGCAGTTTAAATGTTATGTGGCTGTATAAGCAACtgtgttttaaaattaaaattgatgATAAATGACTATTTCCCTTTGGAGTTTGActggcccattttacctgaagctgtggcccattttacctgaaACTGCTCATGCAACAAATGTTGGCAGAGCTGATGTTTCAAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810376.1 True 1311 mRNA 0.46 2 7238071 7239593

Neighbor

gene id symbol gene type direction distance location
trnae-uuc_49 NA coding upstream 24515 7213485 ~ 7213556 (+)
trnae-uuc_48 NA coding upstream 25037 7212963 ~ 7213034 (+)
trnae-uuc_47 NA coding upstream 26066 7211934 ~ 7212005 (+)
trnae-uuc_46 NA coding upstream 28629 7209371 ~ 7209442 (+)
trnae-uuc_45 NA coding upstream 29141 7208859 ~ 7208930 (+)
LOC120568176 NA coding downstream 150506 7390099 ~ 7437258 (+)
pus10 pus10 coding downstream 373330 7612923 ~ 7640109 (+)
LOC120570741 NA coding downstream 453992 7693585 ~ 7703831 (+)
LOC120563246 NA coding downstream 479363 7718956 ~ 7743994 (+)
LOC120563293 NA coding downstream 518093 7757686 ~ 7765391 (+)
G2374 NA non-coding upstream 89587 7147274 ~ 7148484 (+)
G2361 NA non-coding upstream 151812 7085736 ~ 7086259 (+)
G2355 NA non-coding upstream 182264 7055267 ~ 7055807 (+)
LOC120562278 NA non-coding upstream 208949 7026754 ~ 7029122 (+)
G2335 NA non-coding upstream 279741 6957681 ~ 6958330 (+)
G2386 NA non-coding downstream 2228 7241821 ~ 7243472 (+)
G2428 NA non-coding downstream 145539 7385132 ~ 7385353 (+)
G2486 NA non-coding downstream 314447 7554040 ~ 7557441 (+)
G2505 fam161a,LOC102790424 non-coding downstream 349050 7588643 ~ 7591076 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding downstream 362440 7602033 ~ 7603591 (+)
G1973 NA other upstream 703701 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 800854 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 835431 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1321697 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1766662 5387393 ~ 5471409 (+)
G2530 NA other downstream 459672 7699265 ~ 7699540 (+)
G2557 NA other downstream 701954 7941547 ~ 7948253 (+)
G2590 NA other downstream 850220 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1162122 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1377790 8617383 ~ 8643702 (+)

Expression


Co-expression Network