LOC120565143


Basic Information

Item Value
gene id LOC120565143
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7292547 ~ 7307876 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810574.1
ATGGTCTCAGACTCCTCTATAAAATGTCCCTTCCTTCTGACTGTCTTCACTGCAGCAACACCTTGTCTCCAGACACAGAGGACAACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGCTGGAAACACTGAGGCTATGAATCAGAATAGGCTCGAAACAATTGTAAAATACATCATGGAAATGTACTCAGTATGcaataaaggaaacacactaCAGTTCAGTTTGGCTGTAAACATCCCAGAGAACCAGTACCTGAATCTTCAGGAACTCTTCAAAGATGACGTTGCTGACAATGTGAAACGCTTGCTTAAAAAAGGGAAAGTGTACACAAGTAACAATATGGTTGCAGCAATgcctatgaaaaaaaaagatgagcaTGCAGAGGCACGAGTACTGGCCAACATACAACCTTTACCTGACAGTAGTGCGGGTAAAAGTCTGGTCTTCTATTCTTACCTTTCTCCATGTGTCACAAAGTGTGCAAACCCAAAACATGATGATAACATCTTAAAAGATATTAATGAGAAGATTCCAAAAGACAAATGGGCAGaacgtgtttttgtgttttccacAATATTCAAAAAGTACACAGATCAAAATGGCAAAGAGCAAGaattttctgaaaatgaaattaGAGACGCCCTTAAGGAACTTGGAGGAACTACATTAGATTACAACATATTCCGTTGTGACTACTCATACAACGCTCAAGCATCAGACCATTCAGGTCCATTCCAATGCATCAAGTGCTTCAGCAATGGAGCTCCAGAACCTGTTGATGAACATTGTGTTCAAAAAgaattcaaacaaaaaaaaaactagacatAAATGTGTAAAACCCAACAGGGGCTGTGGTAGAGTTGCCATGGAGTAGAGGAGTTCTGGGCTCTACTGTTTTAGGCCCAACTGatggaaaacaaacacaaacacaactggtTCCTACTGAAATTACTTTTAAAGAAATGGATTGATTTATGCCTAACGATGCGCTTTCTCCTTTAAACTACAGTACAAGCTTAATAAAGTAACACGCTggggacacaaacacatgtcaGAAGTTTGCTTTGGTCCAATCATTAACCAGCATTTTCCTGCACACGAGGTTTTAAGTGATTGTTTACCTTAACACGGACTGATTTTGGGGTTGTTCCATTTAACTGTTGTGAATTACCAAATGCCTGCTCTTAATGGTTGAGTCTCCTTAAatcagagtgtggtctagacttactctgtctgtaaagtgtcctgagataactacTGTTATAATTAATAAGAATCATATCCTTCACTGACTGTCAGTGATTTTAGGTTAGTAGGAATTTTCTGCCCTAtccaaataaaaaactaaacttaCTGAAATATGGTAGACTGCTGCGGAGTTTAAACAGCCAGACAATTAAATGTTTAAGTGTATTATAATTATTGCCAATATAAACTAAacaatacataaacatattctaCGATATTTCAAAAAGTCAAAGAGTTGTTTATCAAATACTAATCATGTTAAATGTGGATGTTTAATGTGTATCAACCTCAGTATTTACATGAATCATGTCATTGTACTCAATACTTGTGTAAAGCAAACTGAATCCTCTGATGTTGTGCTCTTTCTGATTAAAGCTTAGCTCAGCATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810574.1 True 1771 mRNA 0.39 4 7292547 7307876

Neighbor

gene id symbol gene type direction distance location
LOC120562943 NA coding downstream 37202 7249581 ~ 7255345 (-)
LOC120565981 NA coding downstream 46134 7241820 ~ 7246413 (-)
b3gnt2a NA coding downstream 68685 7158870 ~ 7223862 (-)
zgc:66455 NA coding downstream 137224 7140734 ~ 7155323 (-)
LOC120569746 NA coding downstream 496939 6795494 ~ 6795608 (-)
usp34 NA coding upstream 133194 7441070 ~ 7551615 (-)
xpo1a xpo1,LOC103359566 coding upstream 246156 7554032 ~ 7582024 (-)
LOC120569612 NA coding upstream 249891 7557767 ~ 7557898 (-)
LOC120569585 NA coding upstream 264445 7572321 ~ 7572457 (-)
fam161a NA coding upstream 277519 7585395 ~ 7601539 (-)
LOC120568064 NA non-coding downstream 16004 7271819 ~ 7276543 (-)
LOC120564702 NA non-coding downstream 24158 7263691 ~ 7268389 (-)
G2392 NA non-coding downstream 124720 7166432 ~ 7167827 (-)
G2367 NA non-coding downstream 165138 7126802 ~ 7127409 (-)
G2362 NA non-coding downstream 206262 7085358 ~ 7086285 (-)
LOC120568185 NA non-coding upstream 126040 7433916 ~ 7441067 (-)
G2451 NA non-coding upstream 128598 7436474 ~ 7438272 (-)
G2743 NA non-coding upstream 324498 7632374 ~ 7633344 (-)
G2732 NA non-coding upstream 334246 7642122 ~ 7662768 (-)
G2750 NA non-coding upstream 414061 7721937 ~ 7722318 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 52397 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 269359 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 270902 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 274888 6999171 ~ 7017659 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 353560 6889288 ~ 6938987 (-)
LOC120569296 NA other upstream 24080 7331956 ~ 7372558 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 340966 7648842 ~ 7690587 (-)
G2752 NA other upstream 431948 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 628064 7935940 ~ 7957621 (-)
G2840 NA other upstream 899376 8207252 ~ 8209535 (-)

Expression


Co-expression Network