zgc:77849 (LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343)


Basic Information

Item Value
gene id zgc:77849
gene name LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15293871 ~ 15298838 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810761.1
CTTAGGTGTTGTCATCGTGTTCCTTTAGTTTGGTGTGTTTTACATTGGGCGTACGGGCGCAGTTTAAGACGTTACAATGCTACTTTAATAgcaatagtttttttcttttctatagATTGTAAGAGTTGTGTAACGTATTTATCCTATAGTATACAGAAGAAAGACCGTTAGGTATCTCCAGGAAACCATCAATCCTACATTTCACACGAAGGCTAACTTTAGTTTATAAGCTACTAGCTAAcgcctaacgttagctatggaggagaagaaggaggagagagaagcggAGATCCAAGAGCACGGCCCCGAACACTGGTTCTCCAAATGGGAACGGCAGTGCTTAGCAGAGGCCGAACGGGATGATCCAAACGAAGAGGAGACGGAACAAAGCCAACAGAAACTGTGGCACCTCTTTCAGAACTCGGCCACTGCGGTAGCACAGCTCTACAAAGATAGAGTGTGTCAGCAGCAAGGCCTCTCTCTCTGGGTGCCCTTCCAGAATGCAGCCACAGCTGTCACTAACCTGTATAAAGAGAGTATGGAGGCCCGCCAGCGGAGCTATGATCTGGGCATCCACTTAGGTCACCAGCGCAGGAATAAGGATGTGATTGCATGGGTTACGAAACGCAGGAGAACTATCAGGCGCGAGGACCTTATCAGCTTCCTATGTGGAAAAGTTCCACCTCCACGGACAGCTCGCGCCCCTCCAAGGGTTGCCATGGTGTCTGCAAGCCGACCATCACCCCCAGAGACAGGTAGCTCTGTGGAGACCGACCTGCAGCCTTTCAGAGAGGCCATAGCACTGCATGGCCTTAGCGGTGCCATGGCAAGCATTTCTGTGCGTTCGGGTCCACCTGGTTCACCAACTCACCCTGCCCAGTCCCTCAGTCGTCGTAGGAATGGTCTTCATGATGTGGACCTCAACACCTTCATCGCTGAGGAGATGGCGCTCCATTTGGATTCAACAGCCAATCGTAAACGAGGCCCTGCCCCCTGTAGTGATGTCATCACAGACTCACCTACTCATAAACGTAACAGGATGCTCTGAACTTTTCCTACACCACTAATCCCTCCGTTGTCCTCTCCTTGGTGGCCGACTGGACAGCTGATGAGGACTGATGCCTTGGCCAACCATTGAAATCTTCCTCCTTTTCATCTTAGTTGCAATGCTACAAATAAACTTAACTATTACCAATCCACACATTTATtccctttatttttctttcaaccCCGTGTTGTCTCACACATCCTTTCTATagcagtgttgttgttttttcagaaaatgttctttcctgtttgtttgattgCCCCCAGTAGATTGGACAGAGAAGCAAGCACACATCACACTTGAAATCCTTAAATTGCAGATTGTTGAGTTAGACATGTTTATTTGGCCAGGCTCCTTTTGTTCTTCATATCCGATAATCAGATGAACTGGGCTGTTGCCTACTGTTTGCAGTTCTGTTCCCTTCATTCCTCGTGCAAACTTTCTCCTCATCTGTGGAGTGCTGGCCGAACCAGACTGGACTGAAACCCGGGCTCCCCGGGAGGCTGAACCACCACCTCGCTGTGTGGCCCGACTCAAAATTCTTGTAAGCGTGTGTATTTcattctgctgctgctctgtgtgtttgcgtaTCTGACAGCAGAACTGCCACTTACTGTGTTGTACTTGTCTTTGCCTTTGAGAAAGCTGCTACAGTATCTCTGGTTGTTGCGCAactgtgggggtgtgtgtgagtgtttgtacGTGTGCTTGTGGATGCAGGATTATGGCAAATCCAGCACCCACTTGACCGAATTATTTCCCGTTTTTACTTTCatcctatatatttttttttttctttagttgcTCTTTGCAGCCCAAACCAGGGTTTTATCACAAAGCAGGTCAGTCCACTTTACCATACTACTACAACACGATAATGGTGACTATCATTACGGTCAGATGTAGCTGACAATTTGAGTAGTGAGGTAACAAGATAAACAAGATGCTTTCCAAAAAAAGGGTTGCTTAAGTACCCATATCCTGCATTCTTATTTGCAAGTTTCAAATCACACTGTTGTTGTCATAGGTATTGTCATGTTTACAAATAATCCAAATATACACCGTTTTCCTGTCTGcatcaaaatatatttgacAAAGCTGTCGAAGCCTGTGTTGTACctactttgtttacatttggcCCTTTGATGAGAACAAACTGGTGCATTGTCATTTTGGCTCTTGTATTTAAGAGTTATAACACTTGTGATTTCAGCTTTAAACCTAGAAAATTACAGGGGGCAGTTGCCTGTGGTATTCTACTTTGCTTAGCCAACTTATGGACTGTTGGGTGTGATGGTTCAGCAAGGCTTTGGGCACTTGTTTTGCTTATTTCGCACACTGCTTTGTGATACAAtcttgtgtaatgtgtgtaaataCCATGTAGGTGCTGTTATATGTGGTACATATTGTAAAAAGAAGTGCAAATCCATTGGGATGTCCATGTACAATAACAATTCTGACATTAAAGAAAATACAAGCGTT

Function

NR:

description
PREDICTED: UPF0472 protein C16orf72 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810761.1 True 2530 mRNA 0.45 4 15293871 15298838

Neighbor

gene id symbol gene type direction distance location
myo15ab myo15a,LOC102296698,LOC101486664 coding downstream 161994 15072782 ~ 15131877 (-)
alkbh5 alkbh5 coding downstream 223133 15065648 ~ 15070738 (-)
mief2 mief2,LOC102193621,LOC100697825 coding downstream 229931 15054451 ~ 15063940 (-)
smcr8b NA coding downstream 241159 15040847 ~ 15052712 (-)
sh2d3a sh2d3a,LOC104966618 coding downstream 417689 14856366 ~ 14876182 (-)
LOC120561684 NA coding upstream 11860 15310698 ~ 15311959 (-)
LOC120557175 NA coding upstream 13594 15312432 ~ 15313905 (-)
foxk1 foxk1 coding upstream 78362 15377200 ~ 15393673 (-)
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding upstream 96997 15395835 ~ 15401445 (-)
gpank1 gpank1 coding upstream 111660 15410498 ~ 15414963 (-)
G4713 NA non-coding downstream 30439 15199745 ~ 15263432 (-)
G4710 NA non-coding downstream 139725 15153544 ~ 15154146 (-)
G4668 NA non-coding downstream 239804 15053466 ~ 15054067 (-)
G4669 NA non-coding downstream 264733 15028486 ~ 15029138 (-)
G4670 NA non-coding downstream 280682 15012925 ~ 15013189 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding upstream 29350 15328188 ~ 15329291 (-)
G4797 NA non-coding upstream 431817 15730655 ~ 15730956 (-)
G4798 NA non-coding upstream 436517 15735355 ~ 15735682 (-)
G4799 NA non-coding upstream 436951 15735789 ~ 15736178 (-)
G4815 NA non-coding upstream 482559 15781397 ~ 15781753 (-)
ubl5 ubl5 other downstream 389642 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 574769 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1251361 14018902 ~ 14042510 (-)
G4168 NA other downstream 1726605 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2253591 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 127706 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1046880 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2113215 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2411801 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2518669 17817507 ~ 17835761 (-)

Expression


Co-expression Network