si:dkey-27h10.2


Basic Information

Item Value
gene id si:dkey-27h10.2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 31739471 ~ 31766897 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810845.1
ACATTCTGAGGCAGTGAGGAAGCAAAGCAGCGAATGAAAGCATAACCTTTGGGCTCAGGGCTTTGATAATTCATACTGCATATGTGGACTTTTCCCACCTGCTGCTGCCATCAAACAAACTTACAATGCCATCGATCAGTCTTTCCTTCTATATCCTGGGTTTGGTTGTGGCTTCTGTCACAGCACAAGATAACGCAACAGGGATTCTCCCAAATTCAACTGAATTTGGTAGTAACGGAAATGATTCCACCACTGTAACACCCCTCAGCAACACCACCAATGTCACAAGAACCACCGACGCCATTACCGTCACCTCCACCAGTACCTTGAATATCAACAGCACCATCCCACCTCCAACAACAAAGCAGAATGGTAGTGAAGGTTCTGGCAAAGAACCCAGAAGTACAGTTCCTTTGATCACCACACCAAAACCCATTGGTCCTTCTAAAACCACAACATCGACCGTCACAACATTAAGCACCACTGCTAAGCCAAAGCCACCAAGCACCACTGCTAAGCCAAATACAGGTGACAGCACTGGCATTATCATCCTAGTTGTGATCATCCTCATAGCTCTTGTATGTGGAGTTGCCTGCTACTTTGCACGGAAGAGAGGAAGGCGCTACTCTGTCGACTTCACTTCCAGACCGGATGAAGCCAACATCCCTCTCAGCACTGTGGAGCCTGAGTTGCCTATTGATACTGTATCTCAGAACGGACTGAAAACCTTTGAAAGTGCAGAAACTACTACAAAAGAGGAGCAAAAACCAGAGGCAAAATCTGAAGTGCAGGAGGAGCAGAAAGctgaggctgataaaTCTGTTGTTGATGCCAGCGCTGAGTCTGCAGCTCCGATGCCATCCCCAAATAGCTCTGAGGACAAACCCAAAGAGGACGTTGTTGAGCAAAGTCCCCCAGCACCTGTGGAGCCAAGTGTGGAGGAGAAAACTGATGATGAAGGTGTCGTCTCCAATAAGACCTCAGTGGAGTCACTGAAGGAGACAAATGAGAACAACAGCAACAATGCTGACTTCAGTCAGAAGAGAGatttgaagaGGAGCAGCATCTTCTGGGACATTCCTCTCGATTGTCCAGTGTGAGACATATCGCCTCTCTGCCCCTGCGCTGTTCTTCAGGAACTCGatTGAAGAAGTAACCGCAGTGGAAAAGGACACGTCTGTTCATACTGAGTGAGAAATCTAGTGGGCTGTTGGCTCcttgttgggg
>XM_039810854.1
ACATTCTGAGGCAGTGAGGAAGCAAAGCAGCGAATGAAAGCATAACCTTTGGGCTCAGGGCTTTGATAATTCATACTGCATATGTGGACTTTTCCCACCTGCTGCTGCCATCAAACAAACTTACAATGCCATCGATCAGTCTTTCCTTCTATATCCTGGGTTTGGTTGTGGCTTCTGTCACAGCACAAGATAACGCAACAGGGATTCTCCCAAATTCAACTGAATTTGGTAGTAACGGAAATGATTCCACCACTGTAACACCCCTCAGCAACACCACCAATGTCACAAGAACCACCGACGCCATTACCGTCACCTCCACCAGTACCTTGAATATCAACAGCACCATCCCACCTCCAACAACAAAGCAGAATGGTAGTGAAGGTTCTGGCAAAGAACCCAGAAGTACAGTTCCTTTGATCACCACACCAAAACCCATTGGTCCTTCTAAAACCACAACATCGACCGTCACAACATTAAGCACCACTGCTAAGCCAAAGCCACCAAGCACCACTGCTAAGCCAAATACAGGTGACAGCACTGGCATTATCATCCTAGTTGTGATCATCCTCATAGCTCTTGTATGTGGAGTTGCCTGCTACTTTGCACGGAAGAGAGGAAGGCGCTACTCTGTCGACTTCACTTCCAGACCGGATGAAGCCAACATCCCTCTCAGCACTGTGGAGCCTGAGTTGCCTATTGATACTGTATCTCAGAACGGACTGAAAACCTTTGAAAGTGCAGAAACTACTACAAAAGAGGAGCAAAAACCAGAGGCAAAATCTGAAGTGCAGGAGGAGCAGAAAGctgaggctgataaaTCTGTTGTTGATGCCAGCGCTGAGTCTGCAGCTCCGATGCCATCCCCAAATAGCTCTGAGGACAAACCCAAAGAGGACGTTGTTGAGCAAAGTCCCCCAGCACCTGTGGAGCCAAGTGTGGAGGAGAAAACTGATGATGAAGGTGTCGTCTCCAATAAGACCTCAGTGGAGTCACTGAAGGAGACAAATGAGAACAACAGCAACAATGCTGACTTCAGTCAGAAGAGAGatTGAAGAAGTAACCGCAGTGGAAAAGGACACGTCTGTTCATACTGAGTGAGAAATCTAGTGGGCTGTTGGCTCcttgttgggg

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko04670 Leukocyte transendothelial migration
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810845.1 True 1227 mRNA 0.48 11 31739471 31766897
XM_039810854.1 False 1131 mRNA 0.47 10 31739471 31766897

Neighbor

gene id symbol gene type direction distance location
frem3 frem3 coding downstream 7384 31701755 ~ 31732087 (-)
usp38 usp38 coding downstream 48407 31682961 ~ 31691064 (-)
gab1 gab1 coding downstream 60710 31623918 ~ 31678761 (-)
inpp4b inpp4b coding downstream 116797 31337222 ~ 31622674 (-)
rnf150a rnf150 coding downstream 420484 31303089 ~ 31318987 (-)
prmt9 prmt9 coding upstream 510959 32277856 ~ 32296565 (-)
nr3c2 nr3c2 coding upstream 628364 32395261 ~ 32480387 (-)
sh3d19 NA coding upstream 1026712 32793609 ~ 32812276 (-)
gatb gatb,LOC102793371 coding upstream 1078397 32845294 ~ 32864094 (-)
fbxw7 fbxw7 coding upstream 1247526 33014423 ~ 33079079 (-)
G9179 smarca5,LOC104965364 non-coding downstream 39171 31699716 ~ 31700300 (-)
G9123 NA non-coding downstream 386123 31352559 ~ 31353348 (-)
G9111 znf330 non-coding downstream 411162 31261992 ~ 31328309 (-)
G9110 NA non-coding downstream 480453 31258786 ~ 31259018 (-)
G9109 NA non-coding downstream 480924 31258331 ~ 31258547 (-)
LOC120567382 NA non-coding upstream 316866 32083763 ~ 32132374 (-)
G9322 dclk2 non-coding upstream 806116 32573013 ~ 32573946 (-)
G9370 rps3a,rs3a,LOC107695588 non-coding upstream 1006307 32773204 ~ 32792497 (-)
G9392 NA non-coding upstream 1070124 32837021 ~ 32839250 (-)
G9395 NA non-coding upstream 1077775 32844672 ~ 32845053 (-)
G8975 NA other downstream 764859 30971388 ~ 30974612 (-)
bnc2 bnc2 other downstream 994593 30575872 ~ 30744878 (-)
G8701 NA other downstream 2145848 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 2399624 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 4444560 27281798 ~ 27294911 (-)
znf827 znf827,LOC102789810 other upstream 167740 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 455060 32221957 ~ 32226423 (-)
lrba NA other upstream 817827 32584724 ~ 32781154 (-)
G9418 fbxw7,LOC104948758 other upstream 1325563 33092460 ~ 33134920 (-)
G9488 NA other upstream 1516181 33283078 ~ 33284080 (-)

Expression


Co-expression Network