tlr3


Basic Information

Item Value
gene id tlr3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 34405052 ~ 34411361 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810998.1
CTACTCGTTTACTTACGGTATGTATCTTAGCCCACACAGTGGTGAGTGTTGCAACACGAATTCTTCCATCGCTTTCCTTTTTTTACACGCGATTAACGACCTACATTACGGCGTAGAtacagtgtttttctttttgggtAACATCACTAACGCATGTCAGACTGTGCGTGACAACGACAACACGACATGGCCTGTTTGTTTACACCACGCCTTACTAAACAAATGAAGCGTTATCGGTCTGTCGAGCCTGGTTATATTAGCCTACATCAGCCACTGGGAATGTTTAATAGCGTCTACTCTGAAGTACTTCACACTGGGTCCAGTCTTTGAAGGAActttgtcagtgtgtgtgtgtgcttcataAGCGTACACTGAGACGAAGAACAGACATGGTGCTGCAGCTGGAAGTGAATGCCTTCGGTTTAAAGTAGGCTATGACGTCTAGATGCAAAAGATAATATGCAAAGGCAAAATCTGgtttttgaaaAGATGCGTGCCCCTCGTTCCCTTCTCCCGTTGGTGATCACCATATGTTATTTTGTGGCGGGACCGCACAATTGCGTGGCATCCCCGAAGAAGAGTTCTTGCTATGTGCAAGACGGCAAAGCTGACTGCCGCCACCTCAGCCTCAGTGAGGTCCCTCCAGACCTTCCCCCGGACATCACCAGCCTGGATATGTCTCACAACCGATTAAAAGAGATTGACCCTGTGACACTAACCACATACTCAGGACTCCTCCACCTCAATATCGGGTACAACAGTATCGCCAAGGTGGACCCGGGTTTGTGCCAGACTCTGCCCCTGCTGCAGACACTGAACATGGAGCACAATCAAGTGTATGTGCTGAAGAAGGAGGATGTGAGCCATTGCACTAATCTAACACGGTTGTTTATGGCTAGTAATAAGCTAAAGCTACAAGGCGAGCCCTTCTCTGCACTACAGAGCCTGGAAGTTCTTGATGTTTCCATGAACAAACTGCATTCAGCTAAGCTCAGTTCTCAGCCTCAGCTGCCCAGCCTCGTGAACCTCAGTCTGGCATTCAATAACATCGCCACTCTCAAGAAAGATGATTTTTCATTTCTTAACCAATCGTTTCTACAATTGCTCAACATGTCATCTGTGCCCCTAAAAACGTTGGAGCCTGGTTGCTTTACGCCCATTTCAAGCCTCCGTACTTTGATCATGGATGGAAGCAGTATGGACACAACGGTTATTTCTAAACTCTGCTCGGAGCTGTCAGGGTCATCCATTGATGTTCTGTTTCTTCGGAAGATGAAGCTGATCAAGCTCACAAACACAACCTTCACAGGGCTACAGAAAACAAATCTAACCTTTCTGGATCTGTCCCGTAACGGCATGGTTGAAATTGAACCAGGCTCATTTCAGTGGCTGTCCAGACTTCTGACTCTAATTTTGATGGACAACAACATCAAGCTCCTGACCAAGGACACATTTCAGGGGCTCAAAAGTTTGAAAAAACTCCAATTGACAAAAGCTCTTGTGAGCGGTCATCACACACCGGTTATCGAGGATTTCTCCTTCCAACCATTAAGTGCTCTGGAAAGTTTGATATTACAGAGAACTGGAGTTCATGCAATCACAGAGTACACATTTACAGGCTTGACAAGCCTTAAAGAACTTGATATGAGCTGGAGTAGTTCAGTTACCTCACTCAGAAACATCACCAGCAAGACCTTTGTCTCACTGGCGCGGTCACCTCTCAGAAAGCTAAATCTAACAGGAACATCTATAGCACAGATTAATCCTGGATGCTTCTCCGTTTTGAGAAATCTCACCACTCTTCTTCTAGAGTTCAACTTTATCAAGCAAAATCTCACTGGCAAAGAGTTTGAAGGCCTGGGCCAGGTTGAAGAGATTCACATGTCCAATAACCAACAGACAGTCAATCTAGGCTCCATGTCGTTCGTTAATGTGCCCAAACTTAGGTTCCTGACTTTGGCAAAAAGTCTTAAAGCCGAAGCCGTGAACCTGGATCCCTCTCCATTCCGCCACCTGCCCAACCTCACCTTCCTGGATCTCAGCAACAACAACATTGCTAACATCAGAGAGAATATGTTGGAGGGGCTTGTGAACCTCAAGGTGCTGAAGCTCCAACACAACAACTTTGCCCGTTTGTGGAAGAGTGCCAACCTAGGTGGGCCGGTGTTGTTTCTCAAACACACACGGAGGTTGACAACCTTACAGATGGATTATAACGGGCTGGATGAGATCCCAGCAGAGGCTCTGAGAGGGTTGAGTGACCTCCGTCAACTCAGCCTGGCCAACAACCTCCTCAATAGGCTTAAGGACTCCGTTTTTGATGATCTGAACTCACTGCAGGTTTTAAATTTACAGAAGAATCTGATCACGGCTGTGAGGCCTGAGGTGTTCAAAACTCCTCTGAGCAACCTCAGGCGGCTTGTCCTAGACAAAAATCCATTTGACTGCACGTGTGAGAGCATGCTGTGGTTCGTGACATGGTTGAATGACACAAATGTGACCAGCGTGCCAAGTCTCAGGGACCAGTACATGTGCAACACTCCACTAGGGTATTTCAACCACTCCATCCTGGATTTTGACGGCCTCTCTTGCAAAGATATGACCCCATTTCAGGCTCTTTACATACTGAGCAGCACCGCTGTCATCATGCTCATAGTAACTGCGCTTCTGGTGCGGTTCCAAGGCTGGAGGATCCAGTTTTATTGGAACATATTGATCAATCGCACATTAGGATTTAGCGACGCCACAGTTGAAGAGGGCAGGGAATTTGAGTATGATGCTTACATCATACATGCAGATGAAGACAGCAGCTGGGTAGAAAGAAGGATGGTCCCCTTGGAGAATGACCAGTGCAGGTTTTGTTTGGAGGATCGAGATGCAGTCCCTGGCACGTCACAGCTTCAATCCATTGTGGAAAATATGAGAAATTCCAGAAAAATCTTGTTTGTTGTCACTGAAACTCTTCTCAAAGATCCCTGGTGTAGACGATTTAAAGCCCATCATGCACTTCACCAGGTCATTGAAGCCAGCAGGGACTCTGTGGTTCTGGTCTTCCTGCAGGACGTCCACGACTACAAGTTGTCTCACTCACTCTTACTCCGCAGGGGCATGTTGCGTCCTTGCTGCATCCTGGACTGGCCTGTCCATAAGGAGAGGGTGCCGGCCTTTCACCAGAAACTCCTCATAGCACTTGGCATGACTAATCGATTGCAGAAGTAACCCTATCCCATTGGTAGTAATGGGGGAATTTCCTGTGTAATAACTTCCAATGTATGTTCCATTATTACTAATTGCAACCAATTGCAGAttgttttgctctctgtgtgaatACCATGcttactgtatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgtattctAACCTGTCATATTGTATTTACATTGCATTGCAGCTTTACATCAACAGAAATTCCAATAAAACAACACAGGtctgtttttttcaaatggtaa
>XM_039811009.1
TCTACTCGTTTACTTACGGTATGTATCTTAGCCCACACAGTGGTGAGTGTTGCAACACGAATTCTTCCATCGCTTTCCTTTTTTTACACGCGATTAACGACCTACATTACGGCGTAGAtacagtgtttttctttttgggtAACATCACTAACGCATGTCAGACTGTGCGTGACAACGACAACACGACATGGCCTGTTTGTTTACACCACGCCTTACTAAACAAATGAAGCGTTATCGGTCTGTCGAGCCTGGTTATATTAGCCTACATCAGCCACTGGGAATGTTTAATAGCGTCTACTCTGAAGTACTTCACACTGGGTCCAGTCTTTGAAGGAAgtttttgaaaAGATGCGTGCCCCTCGTTCCCTTCTCCCGTTGGTGATCACCATATGTTATTTTGTGGCGGGACCGCACAATTGCGTGGCATCCCCGAAGAAGAGTTCTTGCTATGTGCAAGACGGCAAAGCTGACTGCCGCCACCTCAGCCTCAGTGAGGTCCCTCCAGACCTTCCCCCGGACATCACCAGCCTGGATATGTCTCACAACCGATTAAAAGAGATTGACCCTGTGACACTAACCACATACTCAGGACTCCTCCACCTCAATATCGGGTACAACAGTATCGCCAAGGTGGACCCGGGTTTGTGCCAGACTCTGCCCCTGCTGCAGACACTGAACATGGAGCACAATCAAGTGTATGTGCTGAAGAAGGAGGATGTGAGCCATTGCACTAATCTAACACGGTTGTTTATGGCTAGTAATAAGCTAAAGCTACAAGGCGAGCCCTTCTCTGCACTACAGAGCCTGGAAGTTCTTGATGTTTCCATGAACAAACTGCATTCAGCTAAGCTCAGTTCTCAGCCTCAGCTGCCCAGCCTCGTGAACCTCAGTCTGGCATTCAATAACATCGCCACTCTCAAGAAAGATGATTTTTCATTTCTTAACCAATCGTTTCTACAATTGCTCAACATGTCATCTGTGCCCCTAAAAACGTTGGAGCCTGGTTGCTTTACGCCCATTTCAAGCCTCCGTACTTTGATCATGGATGGAAGCAGTATGGACACAACGGTTATTTCTAAACTCTGCTCGGAGCTGTCAGGGTCATCCATTGATGTTCTGTTTCTTCGGAAGATGAAGCTGATCAAGCTCACAAACACAACCTTCACAGGGCTACAGAAAACAAATCTAACCTTTCTGGATCTGTCCCGTAACGGCATGGTTGAAATTGAACCAGGCTCATTTCAGTGGCTGTCCAGACTTCTGACTCTAATTTTGATGGACAACAACATCAAGCTCCTGACCAAGGACACATTTCAGGGGCTCAAAAGTTTGAAAAAACTCCAATTGACAAAAGCTCTTGTGAGCGGTCATCACACACCGGTTATCGAGGATTTCTCCTTCCAACCATTAAGTGCTCTGGAAAGTTTGATATTACAGAGAACTGGAGTTCATGCAATCACAGAGTACACATTTACAGGCTTGACAAGCCTTAAAGAACTTGATATGAGCTGGAGTAGTTCAGTTACCTCACTCAGAAACATCACCAGCAAGACCTTTGTCTCACTGGCGCGGTCACCTCTCAGAAAGCTAAATCTAACAGGAACATCTATAGCACAGATTAATCCTGGATGCTTCTCCGTTTTGAGAAATCTCACCACTCTTCTTCTAGAGTTCAACTTTATCAAGCAAAATCTCACTGGCAAAGAGTTTGAAGGCCTGGGCCAGGTTGAAGAGATTCACATGTCCAATAACCAACAGACAGTCAATCTAGGCTCCATGTCGTTCGTTAATGTGCCCAAACTTAGGTTCCTGACTTTGGCAAAAAGTCTTAAAGCCGAAGCCGTGAACCTGGATCCCTCTCCATTCCGCCACCTGCCCAACCTCACCTTCCTGGATCTCAGCAACAACAACATTGCTAACATCAGAGAGAATATGTTGGAGGGGCTTGTGAACCTCAAGGTGCTGAAGCTCCAACACAACAACTTTGCCCGTTTGTGGAAGAGTGCCAACCTAGGTGGGCCGGTGTTGTTTCTCAAACACACACGGAGGTTGACAACCTTACAGATGGATTATAACGGGCTGGATGAGATCCCAGCAGAGGCTCTGAGAGGGTTGAGTGACCTCCGTCAACTCAGCCTGGCCAACAACCTCCTCAATAGGCTTAAGGACTCCGTTTTTGATGATCTGAACTCACTGCAGGTTTTAAATTTACAGAAGAATCTGATCACGGCTGTGAGGCCTGAGGTGTTCAAAACTCCTCTGAGCAACCTCAGGCGGCTTGTCCTAGACAAAAATCCATTTGACTGCACGTGTGAGAGCATGCTGTGGTTCGTGACATGGTTGAATGACACAAATGTGACCAGCGTGCCAAGTCTCAGGGACCAGTACATGTGCAACACTCCACTAGGGTATTTCAACCACTCCATCCTGGATTTTGACGGCCTCTCTTGCAAAGATATGACCCCATTTCAGGCTCTTTACATACTGAGCAGCACCGCTGTCATCATGCTCATAGTAACTGCGCTTCTGGTGCGGTTCCAAGGCTGGAGGATCCAGTTTTATTGGAACATATTGATCAATCGCACATTAGGATTTAGCGACGCCACAGTTGAAGAGGGCAGGGAATTTGAGTATGATGCTTACATCATACATGCAGATGAAGACAGCAGCTGGGTAGAAAGAAGGATGGTCCCCTTGGAGAATGACCAGTGCAGGTTTTGTTTGGAGGATCGAGATGCAGTCCCTGGCACGTCACAGCTTCAATCCATTGTGGAAAATATGAGAAATTCCAGAAAAATCTTGTTTGTTGTCACTGAAACTCTTCTCAAAGATCCCTGGTGTAGACGATTTAAAGCCCATCATGCACTTCACCAGGTCATTGAAGCCAGCAGGGACTCTGTGGTTCTGGTCTTCCTGCAGGACGTCCACGACTACAAGTTGTCTCACTCACTCTTACTCCGCAGGGGCATGTTGCGTCCTTGCTGCATCCTGGACTGGCCTGTCCATAAGGAGAGGGTGCCGGCCTTTCACCAGAAACTCCTCATAGCACTTGGCATGACTAATCGATTGCAGAAGTAACCCTATCCCATTGGTAGTAATGGGGGAATTTCCTGTGTAATAACTTCCAATGTATGTTCCATTATTACTAATTGCAACCAATTGCAGAttgttttgctctctgtgtgaatACCATGcttactgtatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgtattctAACCTGTCATATTGTATTTACATTGCATTGCAGCTTTACATCAACAGAAATTCCAATAAAACAACACAGGtctgtttttttcaaatggtaa

Function

NR:

description
Toll-like receptor 3

GO: NA

KEGG:

id description
K05401 TLR3, CD283; toll-like receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810998.1 True 3536 mRNA 0.46 6 34405052 34411360
XM_039811009.1 False 3395 mRNA 0.46 5 34405052 34411361

Neighbor

gene id symbol gene type direction distance location
LOC120564947 LOC101485601,LOC102207182,LOC103357494,LOC100703355,LOC102781869,LOC102299071 coding downstream 4058 34390148 ~ 34400994 (-)
frg1 NA coding downstream 799920 33592642 ~ 33605132 (-)
asah1b asah1,LOC102779657 coding downstream 816011 33580853 ~ 33589041 (-)
sart1 sart1 coding downstream 853495 33548703 ~ 33551557 (-)
LOC120564990 LOC104967107,LOC102294790,LOC103370278 coding downstream 857669 33539583 ~ 33547383 (-)
npy2r NA coding upstream 105426 34516787 ~ 34521757 (-)
LOC120561135 lrat,LOC103357487,LOC103156491,LOC107094918 coding upstream 115692 34527053 ~ 34529098 (-)
LOC120557822 LOC104965748 coding upstream 145612 34556973 ~ 34560875 (-)
fam193a fam193a coding upstream 229843 34641204 ~ 34664220 (-)
slkb LOC103355271,LOC100692830,LOC107394353 coding upstream 530022 34941383 ~ 34974821 (-)
G9732 NA non-coding downstream 39774 34365016 ~ 34365278 (-)
G9730 NA non-coding downstream 49726 34355008 ~ 34355326 (-)
G9695 NA non-coding downstream 75087 34329717 ~ 34329965 (-)
LOC120562219 LOC107384803,LOC107386814 non-coding downstream 134588 34264560 ~ 34270464 (-)
G9673 NA non-coding downstream 181945 34222887 ~ 34223107 (-)
G9745 NA non-coding upstream 51597 34462958 ~ 34468183 (-)
G9747 NA non-coding upstream 62811 34474172 ~ 34478450 (-)
G9770 NA non-coding upstream 118982 34530343 ~ 34532004 (-)
G9836 arfip1 non-coding upstream 269180 34680541 ~ 34685004 (-)
G9838 NA non-coding upstream 294497 34705858 ~ 34706062 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 879537 33497102 ~ 33525515 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other downstream 1040827 33306785 ~ 33364225 (-)
G9488 NA other downstream 1120972 33283078 ~ 33284080 (-)
G9418 fbxw7,LOC104948758 other downstream 1270132 33092460 ~ 33134920 (-)
lrba NA other downstream 1623898 32584724 ~ 32781154 (-)
G9740 NA other upstream 41489 34452850 ~ 34457635 (-)
G9997 NA other upstream 987279 35398640 ~ 35400474 (-)
rgs12b rgs12,LOC104946104 other upstream 993454 35404815 ~ 35451211 (-)
LOC120572869 NA other upstream 1173109 35584470 ~ 35586613 (-)
micall1a LOC100693188 other upstream 1532687 35944048 ~ 35969266 (-)

Expression


Co-expression Network