LOC120565400


Basic Information

Item Value
gene id LOC120565400
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9006939 ~ 9011578 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811212.1
TTCTGTATAgtgactttttattgtttttaatgaaatgtgtCTTTATACATTTTCTCCTCCAGATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGTAGACAAACCTCTCAGTGAAGGACCACAGCTCGTCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTGCAGCTGAGAACAAGCTGGGGAGGAACACATCTCAATACAAATTTATTGATGTGAAATATGCTCCAAAGGTTGGTCCCCTGTCTCTGACTCCCACTGGGGAGATCAGAGAGAACAGTAGAGTGACtctgacctgtagcagtgatgctaacccagcagctaCTTATACCTGGTACAAGGATGGTAAACCTCTCTATAAAAATACACAGATTGTCTTCAGCTCCATCCAGTCCTCTGACTCTGGAcgttattactgtaaagctgAGAACAAGTTGGGGAGGAGGACATCTAAATCCATCTTTATTGATGTGAAATATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaacccagcagctaCTTATACCTGGTTGAAGAGCAATGTAAAGCTCAGACCTCCCATTGAAGAACAACAGCTGGTCCTCACGTCCATTCAGTCCTCTCACTCTGGACAATATACATGTAGAGCTAGGAACAGCCTGGGGCCTAACACATCCAAACCCATTTCTATTCAAGTGAAATATGGTCCAAAGATTacctctgtgtcagtgagtccTTCTGGTGACATCATGGAGGGCAGTTCAGTGAAtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGATTCACCAAAAGCATCAGGGCAGATCTTCACCATCACTGATGTTAGACCTGAACACAGTGGGAATTATTACTGTGAAGCCCAGAACAGAAGAGGACGTCAGAACTCCACCTTAAATCTGATTGTTGTAGCAGGGAATTCAACAACAATAATGCATATCATCTGGCCGACTGTGGTGGTCCTGATGCTGATTGCTCTGCTGCTCCTGAGTCTGTGGGGGGTTGGACTCAATTCAGGAAGAAGAAAACTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811212.1 True 1222 mRNA 0.46 6 9006939 9011578

Neighbor

gene id symbol gene type direction distance location
LOC120559379 NA coding downstream 52097 8943845 ~ 8954842 (-)
dla LOC103359048,LOC108245305 coding downstream 87795 8912382 ~ 8919144 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding downstream 149161 8818287 ~ 8857778 (-)
LOC120569430 NA coding downstream 189754 8801253 ~ 8817185 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 220273 8776022 ~ 8786666 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 154410 9165988 ~ 9246905 (-)
hoga1 hoga1,LOC102797601 coding upstream 293369 9304947 ~ 9331554 (-)
LOC120559457 LOC103383201,LOC105931257 coding upstream 385252 9396830 ~ 9412357 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding upstream 466102 9477680 ~ 9489740 (-)
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding upstream 566864 9578442 ~ 9587966 (-)
LOC120559564 NA non-coding downstream 20329 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding downstream 25961 8974604 ~ 8980978 (-)
LOC120558812 NA non-coding downstream 114576 8890846 ~ 8892363 (-)
G2961 NA non-coding downstream 206210 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 206806 8799491 ~ 8800133 (-)
G3036 NA non-coding upstream 15429 9027007 ~ 9027944 (-)
G3052 NA non-coding upstream 110135 9121713 ~ 9124011 (-)
G3053 NA non-coding upstream 114605 9126183 ~ 9126700 (-)
G3048 NA non-coding upstream 141672 9153250 ~ 9153699 (-)
G3049 NA non-coding upstream 144361 9155939 ~ 9160172 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 98853 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 238966 8758649 ~ 8767973 (-)
wipf2a NA other downstream 505777 8435799 ~ 8501162 (-)
G2840 NA other downstream 797404 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 1049318 7935940 ~ 7957621 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 497026 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 513683 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 829012 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 846502 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1887980 10899558 ~ 10905235 (-)

Expression


Co-expression Network