LOC120565745


Basic Information

Item Value
gene id LOC120565745
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10172085 ~ 10181987 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811752.1
TGTCTTATCAAGACAACTCGCTTTCACATTAAGTTTCTTATGTGACTGACTTGATACATATGTACATTATTTACCTGCAGGcatgttttattatttctgaACTTACACACAGAGAAATGAGAGGAGCAGCTTGGAGTGGATTGGTCGTCCTTCTCTTCACTGTACCAGTGATACAGAGTCAGAATGGCTGGGGAGTGACTTACACCTCTACTCAGATCTGTGCCTTAAAGGGATCAACAGTGGAAATACGCTGCAGCTACAGATACCCATCCACCATTGTTGGTGGAGTAAAGGAAACATTCTGGTTTACAAAAGAGAGTAATAATGTTTACGTGGATCTGACAACGGACCCAGAGTATTCAGGTCGTGTGCAGTATCACTCTGAAAACAAGGACTGCACTCTGAGAATCtcagacctgagagagagagactcagctGAGTACAAGTTCAGGTTCGCAACAAACCAAGATGGGAAATATACTGGTTATCCTGGAGTCACTCTGTCGGTCACAGGTCTCCAGGTGCAGATTAGTGGATTCTACACGTCCTCTAACAAGGCAGATCTGAAGTGTCAGAGCAGTTGTCCTCTACCTGGTCATCCTTCCTACATCTGGTACAAGAATGGACAGGACATTCAGGGACAAACATCTGATTCGTATTCAGCCTCCTTGGATCCTGCAGACAGCTTTTCCTGTGCTGTAAGAGGACATGAGAACTCCCGCTCTCCTTCAGTGTATCCACAGCTCCAGGTACATGTGAGGAGATCAACAGTCAGATCCCACCAACAGCCTACCTGGACAGAACTGACATGTCATAACAAGTGTCAGCTGCCTGATCATTACTCCTACATCTGGTACAAGAACGGACAGAAATTTGGAGATAAAAAAGTTTACTTTCATCTAGACCTATTTAATCCTGCAGACAACTATTCTTGTGCTGTATCAGGATACGAGATGTTCCCCTCTCCTTCAGTGTATGCTCCAAAGCGtccctctgtgtcagtgagtccTTCTGGTGATTTAATGGAGGGAAGTTCAGTAAATGTGACTTGTAAcagtgatgctaacccagcagctaACTACAGCTGGTACAAGAATAATCTAGTTTCCGAACGCCTCAGTGAAGGACCACAGCTCATCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACAAGCTGGGGAGGACATCAGCAAACATCTCTATTAATGTCAAATATGCTCCAAAGcttccctctgtgtcaATGGTCCAAAGGAtccctctgtgtcacagtgatgctaacccagcagctaGATACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACTTCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCCCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGATAAATCAACAATAACACTGATAACAAACAGCATCAGGTTGACTctggtgggggttggggggctgattcctctgcttcttttttgtcgGAGGATGAGGAAGAAGAAAGCTCTGAGCTCCACCACTGAACCAAATGAACCCATAGAGACTgtggagACTCTTGTCCTGAGTATGAGGAAATCTCAGAGACTGCAGCACAAACAGAAGACCCAGAGGAGCAGGAAGACCTGGTGTGAAGCCAAACCAGAGGGAGACTCACAtggaggaaaacaaaaagaagtCTTTAACTCCAAACGTTTTCACTCTCAGTTTTTTAGAAGCAGCAGGTAGCAGAAGATCAGAgaagaatgcagctttatttgtacctGTGCAGGTACATAACAGAACTGAACTCAGTTCAGGATTTGACTTGGTAAGCCAGTAAAGTCCAACTATTCCACAGCATGTACAGCAGATCTTACATGGTATATTTTTACACATTGAAAAACATGAGCTCAGCTCTGCCAAACTTTGCTAGTTGTTCATTTGTATTGAatgaattgtattgtattgcatGTATTGTAGTGTGAACATCATGCCAGTtccctctcactgctgcagagggCGATAGAGTTCAGGTGCAAGCTTTTGATTTCAGCTTTAAACAAACTCTTTTTGTGTTCATTCTTCAGAATGAAGATTTTATTGATCAGTAATGAGTGCACATAAAATTTAAATCAGTTGGTATGCTCTGACGTATTTCTCACTTGCCCAATGTTGTCCATCTGTAAAACTTGTCACAGTATAATAAACGTTTACTCTGGTGAACAACCTAAAACAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811752.1 True 2292 mRNA 0.44 12 10172085 10181987

Neighbor

gene id symbol gene type direction distance location
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 584119 9578442 ~ 9587966 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 682345 9477680 ~ 9489740 (-)
LOC120559457 LOC103383201,LOC105931257 coding downstream 759728 9396830 ~ 9412357 (-)
hoga1 hoga1,LOC102797601 coding downstream 840531 9304947 ~ 9331554 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding downstream 925180 9165988 ~ 9246905 (-)
LOC120567750 LOC103370659 coding upstream 315336 10497323 ~ 10571770 (-)
LOC120567745 LOC101486982,LOC102213734 coding upstream 397298 10579285 ~ 10624015 (-)
ccdc130 ccdc130 coding upstream 443337 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 465090 10647077 ~ 10655066 (-)
ier2b NA coding upstream 742684 10924671 ~ 10926308 (-)
G3439 NA non-coding downstream 11276 10159224 ~ 10160809 (-)
G3424 NA non-coding downstream 71687 10099057 ~ 10100398 (-)
G3421 NA non-coding downstream 72823 10088618 ~ 10099262 (-)
LOC120559577 NA non-coding downstream 98257 10073101 ~ 10073828 (-)
G3418 NA non-coding downstream 99112 10072326 ~ 10072973 (-)
LOC120559609 NA non-coding upstream 29437 10211424 ~ 10212875 (-)
G3493 NA non-coding upstream 442793 10624780 ~ 10625062 (-)
G3498 NA non-coding upstream 475349 10657336 ~ 10662561 (-)
G3557 LOC103372545 non-coding upstream 651583 10833570 ~ 10833876 (-)
G3566 NA non-coding upstream 696704 10878691 ~ 10878890 (-)
G3373 LOC103359075 other downstream 130081 9840590 ~ 10042004 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 531571 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 604240 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 1263999 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 1404112 8758649 ~ 8767973 (-)
G3586 LOC104950333 other upstream 717571 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 784375 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 2460026 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 2622515 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 2678297 12860284 ~ 12860355 (-)

Expression


Co-expression Network