LOC120565820 (cuta,LOC103356700,LOC102777976)


Basic Information

Item Value
gene id LOC120565820
gene name cuta,LOC103356700,LOC102777976
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12320596 ~ 12328636 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811865.1
CCCACTCGCTTTACGGTAGTGGGTCGCTCGCTAAGCACAGCCAGGCAGCTGTAAGAAGGGAAAAGTTCCAGTGATTTTTCAATTCCAAGCAGCTCCTTACACTTGACTCATCATAAAGCAGAATGTGTCCGTCAGATCGGCATACAGAAgatctggtttaatggcatcgTACAGTTTTGAGGCAATGCACATTGGACTGCCCAGTGCAGAGACACTGCAAGGTGGATCCTTCAAAGCTTTGGTTGTGACGGTGCTCCTGAGTGTGTTTATGTTCCCTCTGCTGAGGACTGTTGGACTGAGGGCCTTCTCCATGGCGTCTGAGACGTACACTTCTGGTACACACTCTGCAGCCTTCGTCACTTGTCCCAACGACACAGTGGCTAAAGACTTGGCCAGGGGTATTGTGGAAAGGAAACTAGCTGCGTGCGTCAACATTGTCCCAGCAATCACATCTGTatatGAATGGCAGGGTAAGATTGAGGAGGACAATGAAGTGCTGCTGATGATTAAAACGAGAAGTTCCAAGGTGCCGGCTCTCGCTGAATATGTCCGCTCCAACCATCCTTATGAGGTGGCCGAGGTCATCAGTCTGCCCATTGACCAAGGCAACCCGCCCTACCTCAAGTGGATAGGACAAGTTGTCCCCGAGTGAGGATGGACCGATGGACGAGTGGATGAATTAAATCCTGGATGGATGTaaaactgaatctgaaaaaCACTTTTCTATTTCCCTCAAAGAGACAGCAAGACACTATCCAAATCAGTAATGTTATTAATAACTGCACAAGACCAAGAGTTACAAGATGAGACAAAGTGCCCATCATGTAAATAAGCAACACACTGGGTGTTTTAAAAAGATCCAAACTATGATGTTATCTAAAATATCTTTGCCATGTTCCAGCCATTATTTGATTCTTGTAAGTGTTAATATTTCCCTTTCATTATGTTTACCTCTAGAGGGCAGACTTGGTCTTTTGAATTTCAAAGTTAACCAGGTGCAGAATCAACTGTGCTACAGCTTTGACTAGTTTGAACATGCCACTGTAATGTTTGAACCGACATCAGTTGGATTTCTCGTTTCTTTTGTGAAAGAAGCATTTTTGCAATAAAGTGGaggattattttttaa
>XM_039811874.1
TTGAGAGCCTGCTGATTTACGACAGTTTCAAAAACACACCGCCCACTCGCTTTACGGTAGTGGGTCGCTCGCTAAGCACAGCCAGGCAGCTGTAAGAAGGCAATGCACATTGGACTGCCCAGTGCAGAGACACTGCAAGGTGGATCCTTCAAAGCTTTGGTTGTGACGGTGCTCCTGAGTGTGTTTATGTTCCCTCTGCTGAGGACTGTTGGACTGAGGGCCTTCTCCATGGCGTCTGAGACGTACACTTCTGGTACACACTCTGCAGCCTTCGTCACTTGTCCCAACGACACAGTGGCTAAAGACTTGGCCAGGGGTATTGTGGAAAGGAAACTAGCTGCGTGCGTCAACATTGTCCCAGCAATCACATCTGTatatGAATGGCAGGGTAAGATTGAGGAGGACAATGAAGTGCTGCTGATGATTAAAACGAGAAGTTCCAAGGTGCCGGCTCTCGCTGAATATGTCCGCTCCAACCATCCTTATGAGGTGGCCGAGGTCATCAGTCTGCCCATTGACCAAGGCAACCCGCCCTACCTCAAGTGGATAGGACAAGTTGTCCCCGAGTGAGGATGGACCGATGGACGAGTGGATGAATTAAATCCTGGATGGATGTaaaactgaatctgaaaaaCACTTTTCTATTTCCCTCAAAGAGACAGCAAGACACTATCCAAATCAGTAATGTTATTAATAACTGCACAAGACCAAGAGTTACAAGATGAGACAAAGTGCCCATCATGTAAATAAGCAACACACTGGGTGTTTTAAAAAGATCCAAACTATGATGTTATCTAAAATATCTTTGCCATGTTCCAGCCATTATTTGATTCTTGTAAGTGTTAATATTTCCCTTTCATTATGTTTACCTCTAGAGGGCAGACTTGGTCTTTTGAATTTCAAAGTTAACCAGGTGCAGAATCAACTGTGCTACAGCTTTGACTAGTTTGAACATGCCACTGTAATGTTTGAACCGACATCAGTTGGATTTCTCGTTTCTTTTGTGAAAGAAGCATTTTTGCAATAAAGTGGaggattattttttaa

Function

symbol description
cuta Enables enzyme binding activity. Involved in protein localization. Located in membrane.

NR:

description
PREDICTED: protein CutA homolog isoform X1

GO:

id name namespace
GO:0010038 response to metal ion biological_process

KEGG:

id description
K03926 cutA; periplasmic divalent cation tolerance protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811865.1 True 1129 mRNA 0.44 8 12320596 12328595
XM_039811874.1 False 1047 mRNA 0.45 7 12320596 12328636

Neighbor

gene id symbol gene type direction distance location
LOC120567055 NA coding downstream 17465 12300865 ~ 12303131 (-)
LOC120562870 NA coding downstream 43512 12274686 ~ 12277084 (-)
LOC120562891 NA coding downstream 79506 12237418 ~ 12241090 (-)
LOC120562884 NA coding downstream 98418 12217613 ~ 12222178 (-)
cyth4b LOC103356696,LOC100708025,LOC101487734 coding downstream 125861 12175529 ~ 12194735 (-)
ift27 ift27,LOC102778458 coding upstream 111306 12439942 ~ 12453356 (-)
LOC120543530 tmprss6 coding upstream 360292 12688928 ~ 12703781 (-)
LOC120561143 NA coding upstream 375546 12704182 ~ 12720442 (-)
LOC120561165 NA coding upstream 399265 12727901 ~ 12751429 (-)
LOC120565245 mpst,LOC102779789 coding upstream 423726 12752362 ~ 12755136 (-)
G3783 NA non-coding downstream 56590 12215455 ~ 12264006 (-)
G3781 NA non-coding downstream 64793 12207348 ~ 12255803 (-)
G3780 NA non-coding downstream 68756 12206851 ~ 12251840 (-)
G3747 NA non-coding downstream 146814 12171287 ~ 12173782 (-)
G3707 NA non-coding downstream 525932 11794446 ~ 11794664 (-)
G3821 NA non-coding upstream 99684 12428320 ~ 12428643 (-)
G3828 NA non-coding upstream 106916 12435552 ~ 12437402 (-)
G3847 NA non-coding upstream 138196 12466832 ~ 12496094 (-)
LOC120558164 NA non-coding upstream 184771 12513407 ~ 12515106 (-)
G3857 NA non-coding upstream 227311 12555947 ~ 12616154 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1327395 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1415361 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 2109292 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2278592 9840590 ~ 10042004 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 2752751 9525261 ~ 9567845 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 313377 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 475866 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 531648 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 533058 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 533894 12862530 ~ 12862601 (-)

Expression


Co-expression Network