fdx2 (fdx1l,LOC104950501)


Basic Information

Item Value
gene id fdx2
gene name fdx1l,LOC104950501
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24145402 ~ 24149825 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811905.1
GCCGCTTTCGGTAATGTGACCAAAACAGAATCATGGCTGCCACCGCTGCAGTCCGGTCGAGCATGGGGCTGACTTTGAGACTTTCTCGAAGTATACCGGACTGTAGCATATGTCCCCTTTACAAGTTGAAGAGCTGTGTGACCAGCATGGGTAGTTTACAAAGGATGGGTTCTTTTGATAGCTTTCGAACCATAAATCGACACTTGCAGACGAGTATAGGTCTTTACCACAGTGAGGAGGGGAGCTCCAATGCAGAGGACCCGGATGATGTGGTGAATGTGGTGTATATAGATCGGTCTGGTCAGAGGATCCCAGTTAAGGCCAAAGTGGGAGATAATGTCATGTATCTGGCTCAGAAGCATGGAATTGAACTAGAAGGAGCCTGTGAGGCATCACTGGCCTGCTCAACATGTCACGTCTATGTGAGTGCTTCCCATTTTGATAAACTGCCAGAACCTGAAGAGAGGGAGGATGACATGCTGGACATGGCGCCCATGCTTCAGGAGAACTCCCGGCTGGGATGTCAGATCATTCTCACTTCAGAGCTGGAGGGCATGGAGCTCACCTTGCCCAAAGTCACCAGGAACTTCTATGTGGACGGCCATGTTCCCAAACCTCAttgagaagaggaggagatgatGAAAATTGGAGAAAAATAAAAGGGTGGCGCTGCGAGCTAGACACCTTGTGTGCTGGTTGAGTGAGGGGGCGACCATGAAGACATGCACGGCTAGGATAGTAAAGTCCGTAGCAACTCCCTAGGCTTCTTGCTGGCTGACAAATTCCACAGTTAACCAATGACAAGACAGGCCTGCAGATATCAGACAGAGTCAGACACTATATGATTCCCACTGAAGGTGAAATTAATGGTTACTTCCATAAAAAACTGTGATGGTGAAGTATTTAGCCAAGTGGAGAGTTCTCAGGCCAGCATCAATGCCATTCAATCTCACAAACTGTTCTTTGTTAAAACACCAGGCAATTTAAGAGAcatgtcatgtttgttttataCATTGCAGAGAAAGTTTTAACAAAGTTCATCTTTGTGCCGTTTAATGGAACATTCCGTTACAGCTCATATACGCACAAGTATCACAAGCTGATGTCCTTAGTCATTTCTGCCAGTCCATCATTGTCACTCTAATTTACTTGTCAGATATTGTAAGCATAGCATTTACTTTCATTTCTATGTACTTAAGTTAATTTGTAGGTTTTGTGATAGCTTTTCAGTACCCACTGGCTATAGTTCGTCCCAAGTCATAAGCCtcaaaaatattattttctgCATGGTACTAAAGTCCAACACAGAAGAATAAGAAGAGTTTAGTTGCCTGAAGCTTAAAGAATGGGCTCTCAACAGAGTAAATCAGAATTTAGACTTAAATTGTATCCACTATAAAGATTGCAAAACATTCAGGCTAATTGTTTGAAAAAGTGTCAAAcagaaaattaattttaaagCACTTTCTTTCTGGTGCCAGTGATTAAGGTTTGATTAGTTGATCTGGTTCAGGTGTGCTTTGATCCAGAGCAGAGTCTGTTTGGAGTCTTGTGGGCTTCATGTTACCGTGGAATAAGTTTACCCTTTATCCTCTACCCTTTACTTAAGTCTACTGTACTTGTCCTTACGCACAAATGTCAGTCAATTGTATATATATCATGTcttgaaattaaatatttaaagttgtgcaataaaacaagttttaaaaaGTTA

Function

NR:

description
PREDICTED: adrenodoxin-like protein, mitochondrial

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG:

id description
K22071 FDX2; ferredoxin-2, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811905.1 True 1714 mRNA 0.42 5 24145402 24149825

Neighbor

gene id symbol gene type direction distance location
zglp1 zglp1 coding downstream 195 24137388 ~ 24145207 (-)
LOC120569492 NA coding downstream 9733 24133897 ~ 24135669 (-)
lyl1 LOC105910150 coding downstream 49179 24091667 ~ 24096223 (-)
LOC120556266 LOC103353763,LOC100700287 coding downstream 76574 24066928 ~ 24068828 (-)
rab11fip4b rab11fip4,LOC102782519 coding downstream 459963 23657337 ~ 23685439 (-)
cdkn2d cdkn2d,LOC102798019 coding upstream 64868 24214693 ~ 24217245 (-)
ap1m2 ap1m2 coding upstream 67543 24217368 ~ 24223061 (-)
ldlrb LOC106675973,LOC102204666 coding upstream 77595 24227420 ~ 24241325 (-)
LOC120561874 LOC103353879,LOC104964059,LOC101071906 coding upstream 95848 24245673 ~ 24274926 (-)
atg4da atg4d coding upstream 126091 24275916 ~ 24285789 (-)
LOC120567450 NA non-coding downstream 46309 24096692 ~ 24099093 (-)
G7179 NA non-coding downstream 61126 24082513 ~ 24084276 (-)
LOC120556287 NA non-coding downstream 85558 24056501 ~ 24059844 (-)
G7141 NA non-coding downstream 89642 24015459 ~ 24055760 (-)
LOC120556236 NA non-coding downstream 201829 23937409 ~ 23943573 (-)
G7292 NA non-coding upstream 295355 24445180 ~ 24449314 (-)
G7324 NA non-coding upstream 386555 24536380 ~ 24539504 (-)
G7325 NA non-coding upstream 390139 24539964 ~ 24541406 (-)
G7343 NA non-coding upstream 407653 24557478 ~ 24557697 (-)
G7348 NA non-coding upstream 436201 24586026 ~ 24586319 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 259640 23882745 ~ 23885762 (-)
palm3 NA other downstream 334381 23772856 ~ 23811021 (-)
G7071 NA other downstream 376561 23752026 ~ 23768841 (-)
si:ch211-207j7.2 NA other downstream 399371 23734364 ~ 23746031 (-)
LOC120557242 NA other downstream 424652 23711827 ~ 23720750 (-)
G7323 NA other upstream 382411 24532236 ~ 24535316 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other upstream 515560 24665385 ~ 24669297 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other upstream 606107 24755932 ~ 24759618 (-)
G7589 NA other upstream 1548436 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 1634119 25783944 ~ 25788229 (-)

Expression


Co-expression Network