gpank1 (gpank1)


Basic Information

Item Value
gene id gpank1
gene name gpank1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15410498 ~ 15414963 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811990.1
GTTACGTTCGATGCTCGGTTTACaaacagagaaagaagagagggtaacgttagcttgaaGTAGCATCGTATTATTAGCTAACTCAGTTAGTAAATTCTGTTCCTAGTTAACGTCGTCATCTGGATGGGTGTCTTAAAGCGACGTAATGTTACCGAATTTAGTGCCTTAGCTAGCTAGGTCATTTGAAATTAACAAGCGTTCATGGGTATaaaagctaacgttaatgctgATGCTAATCTAAGCTAAAGCATAATAGCTCTGTTAGCTCAcaattagctagctaggttaaCTAAAGTTAACTTCTTTGCTAAGGCTACAAACGCTGGTTTTCAATCGTTGTATTATTCAGAGATAAAGTGACGCACTATAAATTGTGTTTTGTTAAATGTGTGAAATTATGTTTCAGAATTAACCAGACAGATAACCAGTCGCCCACCTAGCTATAGCTATATCAAAATAAGCAACTTAGCTACGCTAGCTTGAATGCTACGACATAGTACTATGTGAAACAAATAGTAAAAGAGAAGCAGCATTGAACTTTAGCTTAACCGTATGCTGTCATATCTAGAGCATTGTagcttttctttaaaaaaaaaaaaaggagtcttTCATTCAGACCAATTTGTATTGAAAAATAGTTTAACCTGCCACACCTGAAGTGTCACTCATTATGGCTGCACTAGGCTTTACTCCTGCCAGCGGGCAAGATCTTTTCAGCATTGAAACAACCGAAAAATCCAGCTGTGAAACAAGCAACGTACTTAATGGGAATGAGGTCAGGCAGTTTTACGAACATTTAATAAGAGATGGCGAAGGGCAAGATGTATCCAGGAGGAGTGCAATTAGCCAGAAAGATAATGGCAGAGAGCATCAGAATAAACAGAGGAACAGAGAGTCCAGTAGAAGAGCGAGGAGGAGAGCCAGGGCTGCAGAGATGCAGCAGGGTCAAACAGATTCTGTGGTGCAAAGAGTGATGAGTGGTGAAAGTGAAGCCAACCCAAGAAGACCGACAAGCAGTTCTTCAGAAAGAACCATGGAGCTCCTGGGGCTCAGGTTGCTGCGTTGTGCCCATGATGGGGACATCTCTGGCGTTAAAGACCTGCTCTCAAAGGGGGTCGACATCAACTTCCAGGATACTTACTTCTGGACTGCGATGATGTGTGCAAGCTGGTCGGGACAAAGAGCTGTGgtgaggctgctgctgcaacacgGAGCAGCCTGGGTCGGAGTGGTTGATACACAGGGCAGGGATGCCAAAGACCTGGCGCTGGAAGCGGGCCACAATGAGGTATTGGAGGAGTTGGAGAGCTATGGgagaagtacacacagagacacacaatctGATAGCAGTGCCCTCCAGCCTCAGTGGTGCGGTGTGTGTTGTAGCGAGTACAGCAGTAGCCTGTCATCACATCTCTCCTCCACTCTACATCTGTTCAGTCTGCGGCGTGCTCCACCCACCCCTTACTACTGCCTCCCCCCCTCCAGCAACAGCTACAAGATGATGGTTCGTTGCGGCTGGAAACCAGGGACAGGACTAGGGCCAGAGGGAGAGGGGCCTCAACAGCCAGTGCCAACTGTGCTGAAGAGAGACCAGAAAGGCCTTGGGTATGGACAGATGAAAAGAGCCAAAGTTACTCACTTCCAACCCAGGGATCGTGACGCAGTAAAACCACCATccaagaagaaagaggagagaggaggaaaaggacaGAGAAAGGAAGAAAGTAAGAGAAAGGAGCTAAAAGATAAGAACTGGGAAAGAGATTTCCGTGCCTCTTTCTATCTTTGACTCCTGCTTACTGTAACTTTTCTACAAGCCCTTTCTCTCAAACACATCTCAAAGTATCTCTAAAACAAACAATCTATTACAAAGTCAAGTTGGACCTGTTGTAAAGCTCCTGGAAGGTGTTTTCTCACcaattaatatgaatatcttGACTCTACCTCAAAGCTGAAACACCGTATATGGAATTAGTTGTGCCGCTGCCCACAGATGTGCAATGACCAAATGTATTTAATCTTTATCATGGTTGTGTTTTAAACTGTGTCACTAAATATGGCATATTTACTATTGATCCACTAAgacttggattttttttttacattaaaaaatacacTTGTTGAGGTTCATGATCtaggaaaatgttttaaatgtcaaACTGCTATTTTGATatgtttaatataataatacaatataaaGCATAAGAGGAAAATAGTTTAGATATTGAAAGTTGTATCAGTAATTTATCATGAGTGACTGCAGTAATGCTGTTCCTAATACGGTCCATGGTTCTTTAACATAGAATGTTGCAACAGTGAACTCTTCCTCTGGAATAGCTCCAGGTACCTTCTTACCTACTTTGACCCACCTGCACCCATGTGATGGGTGAGTCACGTCATATGCATGTGCATATCTGCCTTATCGTCACATTTGGCCAAGTAATCTAGATTGTTACATCTCATATAGCCTTATATCTCAGAAgccttttattcttttatttgttaGGGTTGGACATGTTTCAGGATTGTATTTAAATAAGCACAGCTCTAGCCACTTCAAAGCCCTGTAACCCATAAGCTCCAAGACTGCTAAACCCCGAAGTCCGTATCATTTTCTAAGTCACAACTTCAAGTTTTGTACACTGATTGaccaggaaaacaaaacaacctgTACACTGTACAGTCTGTattaaacaatattttgttaCATAGAGATGTTGATTTGCTGCTACACAGATTAGATGGACAatgcaatattagaaaaaacATGCAATGCAGTGCAATACAACacaagttattttatttatagagaCCAATATCACAATTTGCCTTAAGGGGCTTaacaatctgtacagcatacaGCACTCTCCTCAAATAAACCCTTTAAGTATAGCCTCATGAAACTGAGTCATCACCTAGATGACTTAGTAGGAGGGCATTGCATTGCATCAGACAGGTGTTTTTGATTTTTCTGGTCATTGAGCACATAGGCGTGTTTTGTAAAGGAATCTGTTGTCCTGTtactttttaacatgtttttacccTCTCTATTCCTCATTACATATTCACGCCATCCCTTCACAGCTTAAATAATTGCTGGGTTGTTTACTGGTCATTTCTATGCTCTACATGTTTTGTATGGTAGTCCTACAAGTGCACAGTTTTCTCATAAATTTCATAGACACGCACTTTAAAA

Function

symbol description
gpank1 Predicted to enable nucleic acid binding activity. Orthologous to human GPANK1 (G-patch domain and ankyrin repeats 1).

NR:

description
PREDICTED: G patch domain and ankyrin repeat-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811990.1 True 3199 mRNA 0.41 4 15410498 15414963

Neighbor

gene id symbol gene type direction distance location
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding downstream 9053 15395835 ~ 15401445 (-)
foxk1 foxk1 coding downstream 16825 15377200 ~ 15393673 (-)
LOC120557175 NA coding downstream 96593 15312432 ~ 15313905 (-)
LOC120561684 NA coding downstream 98539 15310698 ~ 15311959 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding downstream 111660 15293871 ~ 15298838 (-)
LOC120564766 NA coding upstream 4289 15419252 ~ 15424386 (-)
LOC120561525 xylt1,LOC102778305 coding upstream 401375 15816338 ~ 15899401 (-)
nomo LOC446065,LOC107089097,LOC105931477,LOC102292868,LOC102196167 coding upstream 579409 15994372 ~ 16034615 (-)
LOC120561637 gsg1l,LOC104954731,LOC103358062 coding upstream 635801 16050764 ~ 16058353 (-)
sec23b LOC100697981,LOC102779165,LOC101466658 coding upstream 649586 16064549 ~ 16078343 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding downstream 81207 15328188 ~ 15329291 (-)
G4722 arpc1a,LOC102781765 non-coding downstream 89115 15278258 ~ 15321383 (-)
G4713 NA non-coding downstream 147066 15199745 ~ 15263432 (-)
G4710 NA non-coding downstream 256352 15153544 ~ 15154146 (-)
G4668 NA non-coding downstream 356431 15053466 ~ 15054067 (-)
G4797 NA non-coding upstream 315692 15730655 ~ 15730956 (-)
G4798 NA non-coding upstream 320392 15735355 ~ 15735682 (-)
G4799 NA non-coding upstream 320826 15735789 ~ 15736178 (-)
G4815 NA non-coding upstream 366434 15781397 ~ 15781753 (-)
G4860 NA non-coding upstream 578641 15993604 ~ 15994085 (-)
ubl5 ubl5 other downstream 506269 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 691396 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1367988 14018902 ~ 14042510 (-)
G4168 NA other downstream 1843232 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2370218 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 11581 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 930755 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 1997090 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2295676 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2402544 17817507 ~ 17835761 (-)

Expression


Co-expression Network