asah1b (asah1,LOC102779657)


Basic Information

Item Value
gene id asah1b
gene name asah1,LOC102779657
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 33580853 ~ 33589041 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812116.1
GTAAACAGTAGCAGCTTCCGCAGTAAACTTCGTATATTAGCAGCCACGGTACAGCACCAGTCTGGGAGAaatcaaagccggtctacggagtTCTTTGGTGAAATCCTTCAAAAATGGGCCACtgtgtttttctcattttagcGGCTGTGTTTTCCGTCGCATGGACACagtttatcccgccgTACACAGAAGAATGTCGGGAAGAAATGTATCCACCAAAGGGTCCCACGTTCAGAGGAGCTGTCGGTTGGTACACAGTGGACCTCGACCTACCGCCCAGCAAGAGATGGACAGCTCTAatcactgacaaaaaaaatgatCTGGTCAACATGATCCAGGCCATCCGAGACTTGGCTAATGCGTTTGTGCCCAGTGGAAGGCTGATTGAGCTGGTTGACATTACGCTGCCTTTGATGGTGGACACTCTCCCAAACCCTTTCAGTGATGAAATCAAAGGAATTGCAGCTGCTTCAGGGATTCCTCTTGGTGAAGTCGTCTTGTTCAACATCTTCTATGAGGTGTTCACGGTGTGCACATCAGTTGTTGCAGAAGACAATAAGGGTAACCTCATTCATGGTAGAAATCTGGATTTTGGATTATTTATGGGCTGGGATGTGAAAAACAAGTCCTGGATCATTAGTGAGAAGCTGAAGCCTCTGGTTGTCAACCTCGACTTCAAGAGAAATAATCAGACCGTCTTCAAGTCTACAAACTTTGCTGGATACGTTGGCATGCTGACTGGCATCAAGCCTCacatattcactctgactatgAATGAGCGCTTCAGTCTCGATGGAGGATACATTGGAATCCTGGAGTGGATCTTAGGGAAGAGAGATGGGATGTGGATGAGCTTCCTCACTCGCTCAGTCCTAGAAAATGCAACTAGCTACGAGGAAGCCAAAAGTCTCCTGGCTCAGACCAAGCTGCTGGCTCCAGCTTACTTCATCCTCGGAGGAAACCAGACCGGCCAGGGCTGCATCATCACACGGTCCAGACTGCTCAGCATCGACCTCTTGGAgaTTGACCTGAAGCTGGGCCGGTGGTACGTCCTGGAAACAAACTACGACCACTGGAAGGAGCCTTTTTTCCTGGATGATCGCAGAACTCCTGCCATGAGGTGCATGAACCAGACCACACAGACAaatGTCTCCCTGCAGACCATGTATGATGTCCTCTCCACCAAACCAGTGCTAAACAAGttGACCACATACACGACACTGATGCAAGTGTCTGAGGGAAAACTGGAGTCGTATATCCGCGACTGCCCGAATCCCTGCATGCCCTGGTAACGCTCCAACCACTGAACCCTGATCAGTTTGTAAATGCCTATTTGCATGGAGAAGCTGTGATAAAGACAAGCTCAGCTGATCTTGGGGCAGTGTGGATTTTGTTCCTTTTGAACTGTTTGCACAGCTATCAAATCACATGAACCAAAGTTTGTCTTGATATATTGTGTTTTGGTTTCCAGACAATTCAGGAATACTTAAAAGCTTTGATGAAAATACTGaatcttattttgtttttgtttttttgtcattaggAAAATGTACAAAAGTGAATCAAACTTGTAAATGTTTTCCCTCAGTTATTTTTACTGTAATGGGTTATTTGCAAAATGAGTTAATCAGTGATCTCACCATTGGCATAGGGACCCCTGAGATAAAGGCATGTGTGTAATTCAATTAATGCAAAATATGGTTACATTCTTTAGTTAGATTTCTCAAATCCACTCACCATTTAGTGCCTCCACACTGTAGCCCTGCTttattagtttttgtttttgaatcCAGGTCAAACTCAAAATGTCGAACTAGGTTAGTTACAGTTACTGTCTCACATGATCACTGACCATTTTACACACTGATACTGACCAATGTACCTCATGGATTAAGATGGTTAATAAAATGATTCCCAAATGTA

Function

symbol description
asah1 Enables N-acylsphingosine amidohydrolase activity; nuclear receptor binding activity; and transcription corepressor activity. Involved in several processes, including keratinocyte differentiation; negative regulation of nucleic acid-templated transcription; and sphingolipid metabolic process. Located in extracellular space; lysosome; and nucleus. Implicated in Farber lipogranulomatosis; sphingolipidosis; and spinal muscular atrophy with progressive myoclonic epilepsy.

NR:

description
PREDICTED: acid ceramidase

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0048668 collateral sprouting biological_process
GO:0005764 lysosome cellular_component
GO:0017040 N-acylsphingosine amidohydrolase activity molecular_function

KEGG:

id description
K12348 ASAH1; acid ceramidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812116.1 True 1923 mRNA 0.44 14 33580853 33589041

Neighbor

gene id symbol gene type direction distance location
sart1 sart1 coding downstream 29296 33548703 ~ 33551557 (-)
LOC120564990 LOC104967107,LOC102294790,LOC103370278 coding downstream 33470 33539583 ~ 33547383 (-)
casp3a LOC103370277 coding downstream 45797 33528419 ~ 33535056 (-)
prom1b NA coding downstream 231101 33319370 ~ 33349752 (-)
fgfbp2b fgfbp2 coding downstream 265552 33313734 ~ 33315301 (-)
frg1 NA coding upstream 3601 33592642 ~ 33605132 (-)
LOC120564947 LOC101485601,LOC102207182,LOC103357494,LOC100703355,LOC102781869,LOC102299071 coding upstream 801107 34390148 ~ 34400994 (-)
tlr3 NA coding upstream 816011 34405052 ~ 34411361 (-)
npy2r NA coding upstream 927746 34516787 ~ 34521757 (-)
LOC120561135 lrat,LOC103357487,LOC103156491,LOC107094918 coding upstream 938012 34527053 ~ 34529098 (-)
G9584 NA non-coding downstream 7066 33573173 ~ 33573787 (-)
G9565 NA non-coding downstream 54066 33526548 ~ 33526787 (-)
G9537 NA non-coding downstream 154853 33409522 ~ 33426000 (-)
G9540 cpe non-coding downstream 157131 33422805 ~ 33423722 (-)
G9538 cpe non-coding downstream 158616 33406650 ~ 33422237 (-)
G9608 NA non-coding upstream 26582 33615623 ~ 33615920 (-)
G9612 NA non-coding upstream 54039 33643080 ~ 33643396 (-)
G9615 NA non-coding upstream 76227 33665268 ~ 33665794 (-)
G9618 NA non-coding upstream 132802 33721843 ~ 33722073 (-)
LOC120575231 NA non-coding upstream 182822 33771863 ~ 33773421 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 55338 33497102 ~ 33525515 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other downstream 216628 33306785 ~ 33364225 (-)
G9488 NA other downstream 296773 33283078 ~ 33284080 (-)
G9418 fbxw7,LOC104948758 other downstream 445933 33092460 ~ 33134920 (-)
lrba NA other downstream 799699 32584724 ~ 32781154 (-)
G9740 NA other upstream 863809 34452850 ~ 34457635 (-)
G9997 NA other upstream 1809599 35398640 ~ 35400474 (-)
rgs12b rgs12,LOC104946104 other upstream 1815774 35404815 ~ 35451211 (-)
LOC120572869 NA other upstream 1995429 35584470 ~ 35586613 (-)
micall1a LOC100693188 other upstream 2355007 35944048 ~ 35969266 (-)

Expression


Co-expression Network