LOC120565981


Basic Information

Item Value
gene id LOC120565981
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7241820 ~ 7246413 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812192.1
AAAGAAAATGCGCCTTTCCTCTGACCGATCACTGTAGCAGCACCTTCCCTTCAAACACTGAGAAGAAAACCGTCTTCAGAGCATCTGTCAGACATCTTTCTCAACCAAAGAGACGAGAAGATCCTGCTGGCAACAGACGCAAAGATGGCTCGCCTGTGCTGGATGGTTCTGGTCCTGGCCTTCTTCCTGTATGACAGTGTGGCTGCTAGGGAACAGATTAACCTTGACCTCCGTGACACCATCCCACAGGACCAAGACCCAAATGCTCTCCAGCAAGTCTCTAAGGATGACCCAGAGGGTCAAGTGTCCCAGGGGCAGGGACTAGGCGGGGAAGAGGGTGCAGTCCAGTCAACGGGCACAGACACAGGCGAAGAAATGGGTGAAGCCATAGGCACAGAAATGACCATAGGCAAAGGTGGAAAAGGTGGCAAGGGTAAGCGTAAGGGAGGTCGCAAATGTAGAAAAGGTGGCAAGGGTAAGCGTAAGGGATGCGGCAAACGTAGAAAAGGGGGCAAGGGTAAGCGTAAGAGAGGTGGCAAACGTAGAAAAGGTGGCAAGGGTAAGCGTAAGAGAGGCGGCAGAAAATGGGGTAAGGGTAAAAGACGAGGCAAACGTAGCGCAGAAGGAAATACCGAGAGCGACGAGTAAGAGAAACAGGTATTGGGACTTGTTGCCCTGGGGCTGATTGTCGGCAATGATACAGCTAAAATAACTTCATAAGGACCTGAGAATCTGAGCAGCAACCCAATGAAGgtcactgagaaaaaaaaagtgccttATGCTTACTAAAAATGTGCTTGTTTCTTTTACTTCCTCtatatttaaaggtgcactgtgagttcctgcatggtcacttctgttgacgttccaagtaaattcaAAACTAAACAGAGCAAACTCGCtcctccccccatgtttccgtaactgtcatggCTAACTGACTCACTGTCATTAAcctccaccccctcccccaaccatcttttcggtgattggctggagtggtttgttgtattttggtgcacatcCTGTGCCCCTAgcgtttgtttgacgtttacgacccctgtgttgtctatcgagaccgggctttttcacggtgtgttcaagggggcaggcagctagcggatcaaggagagatgcctacgattggAGACCAAAATGAAATCACGCTGAAACCATgtaggaactcatagtgcacttTTAATGACTTCCTTCTGAAATGTGTTAACACTAGGGCTGTGACTCCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTGTGACTCTTCGCTGGTCTCACGATTTgattacgattatcctgtcaGTGATTCAATTTGATATCACGATGCATCACCtatcaatattatatattactgcacatggttttcatcaacaaattcaagcagtcagatatactgtaacaacatagtttcatagcaccttCATTTAAATACACTCTGGTCCAGTAGATCCgaacacctcatatgtaatagttatgtgtgtgggtggggtggggtgtaCCATgtgcattgaaaataagttattttttatgttcttcacagaaaatgagccaaagccaatgagtttgagttagaataattaataaatagcataatgtttcttttagcaaacattgaaaatgggtcccacagacctgaacaccacacaagggttaatgtgaATAAAACTAACCTTTAGTGATTGTACTCTGTACTTCTGTAAAAGGGCATTCTCTTATGTTCTGTTCTTTCTGATTAAAGCTTCGCTCAGCATCTat
>XM_039812275.1
CCTTCCCTTCAAACACTGAGAAGAAAACCGTCTTCAGAGCATCTGTCAGACATCTTTCTCAACCAAAGTAGGAGACGAGAAGATCCTGCTGGCAACAGACGCAAAGATGGCTCGCCTGTGCTGGATGGTTCTGGTCCTGGCCTTCTTCCTGTATGACAGTGTGGCTGCTAGGGAACAGATTAACCTTGACCTCCGTGACACCATCCCACAGGACCAAGACCCAAATGCTCTCCAGCAAGTCTCTAAGGATGACCCAGAGGGTCAAGTGTCCCAGGGGCAGGGACTAGGCGGGGAAGAGGGTGCAGTCCAGTCAACGGGCACAGACACAGGCGAAGAAATGGGTGAAGCCATAGGCACAGAAATGACCATAGGCAAAGGTGGAAAAGGTGGCAAGGGTAAGCGTAAGGGAGGTCGCAAATGTAGAAAAGGTGGCAAGGGTAAGCGTAAGGGATGCGGCAAACGTAGAAAAGGGGGCAAGGGTAAGCGTAAGAGAGGTGGCAAACGTAGAAAAGGTGGCAAGGGTAAGCGTAAGAGAGGCGGCAGAAAATGGGGTAAGGGTAAAAGACGAGGCAAACGTAGCGCAGAAGGAAATACCGAGAGCGACGAGTAAGAGAAACAGGTATTGGGACTTGTTGCCCTGGGGCTGATTGTCGGCAATGATACAGCTAAAATAACTTCATAAGGACCTGAGAATCTGAGCAGCAACCCAATGAAGgtcactgagaaaaaaaaagtgccttATGCTTACTAAAAATGTGCTTGTTTCTTTTACTTCCTCtatatttaaaggtgcactgtgagttcctgcatggtcacttctgttgacgttccaagtaaattcaAAACTAAACAGAGCAAACTCGCtcctccccccatgtttccgtaactgtcatggCTAACTGACTCACTGTCATTAAcctccaccccctcccccaaccatcttttcggtgattggctggagtggtttgttgtattttggtgcacatcCTGTGCCCCTAgcgtttgtttgacgtttacgacccctgtgttgtctatcgagaccgggctttttcacggtgtgttcaagggggcaggcagctagcggatcaaggagagatgcctacgattggAGACCAAAATGAAATCACGCTGAAACCATgtaggaactcatagtgcacttTTAATGACTTCCTTCTGAAATGTGTTAACACTAGGGCTGTGACTCCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTGTGACTCTTCGCTGGTCTCACGATTTgattacgattatcctgtcaGTGATTCAATTTGATATCACGATGCATCACCtatcaatattatatattactgcacatggttttcatcaacaaattcaagcagtcagatatactgtaacaacatagtttcatagcaccttCATTTAAATACACTCTGGTCCAGTAGATCCgaacacctcatatgtaatagttatgtgtgtgggtggggtggggtgtaCCATgtgcattgaaaataagttattttttatgttcttcacagaaaatgagccaaagccaatgagtttgagttagaataattaataaatagcataatgtttcttttagcaaacattgaaaatgggtcccacagacctgaacaccacacaagggttaatgtgaATAAAACTAACCTTTAGTGATTGTACTCTGTACTTCTGTAAAAGGGCATTCTCTTATGTTCTGTTCTTTCTGATTAAAGCTTCGCTCAGCATCTat
>XM_039812356.1
CTTCAAACACTGAGAAGAAAACCGTCTTCAGAGCATCTGTCAGACATCTTTCTCAACCAAAGTAGGTACATGAAATAAGAGACGAGAAGATCCTGCTGGCAACAGACGCAAAGATGGCTCGCCTGTGCTGGATGGTTCTGGTCCTGGCCTTCTTCCTGTATGACAGTGTGGCTGCTAGGGAACAGATTAACCTTGACCTCCGTGACACCATCCCACAGGACCAAGACCCAAATGCTCTCCAGCAAGTCTCTAAGGATGACCCAGAGGGTCAAGTGTCCCAGGGGCAGGGACTAGGCGGGGAAGAGGGTGCAGTCCAGTCAACGGGCACAGACACAGGCGAAGAAATGGGTGAAGCCATAGGCACAGAAATGACCATAGGCAAAGGTGGAAAAGGTGGCAAGGGTAAGCGTAAGGGAGGTCGCAAATGTAGAAAAGGTGGCAAGGGTAAGCGTAAGGGATGCGGCAAACGTAGAAAAGGGGGCAAGGGTAAGCGTAAGAGAGGTGGCAAACGTAGAAAAGGTGGCAAGGGTAAGCGTAAGAGAGGCGGCAGAAAATGGGGTAAGGGTAAAAGACGAGGCAAACGTAGCGCAGAAGGAAATACCGAGAGCGACGAGTAAGAGAAACAGGTATTGGGACTTGTTGCCCTGGGGCTGATTGTCGGCAATGATACAGCTAAAATAACTTCATAAGGACCTGAGAATCTGAGCAGCAACCCAATGAAGgtcactgagaaaaaaaaagtgccttATGCTTACTAAAAATGTGCTTGTTTCTTTTACTTCCTCtatatttaaaggtgcactgtgagttcctgcatggtcacttctgttgacgttccaagtaaattcaAAACTAAACAGAGCAAACTCGCtcctccccccatgtttccgtaactgtcatggCTAACTGACTCACTGTCATTAAcctccaccccctcccccaaccatcttttcggtgattggctggagtggtttgttgtattttggtgcacatcCTGTGCCCCTAgcgtttgtttgacgtttacgacccctgtgttgtctatcgagaccgggctttttcacggtgtgttcaagggggcaggcagctagcggatcaaggagagatgcctacgattggAGACCAAAATGAAATCACGCTGAAACCATgtaggaactcatagtgcacttTTAATGACTTCCTTCTGAAATGTGTTAACACTAGGGCTGTGACTCCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTTTGACACCTTTAATGACTTCCTTCTGAAATGTGTTAATACTAGGGCTGTGACTCTTCGCTGGTCTCACGATTTgattacgattatcctgtcaGTGATTCAATTTGATATCACGATGCATCACCtatcaatattatatattactgcacatggttttcatcaacaaattcaagcagtcagatatactgtaacaacatagtttcatagcaccttCATTTAAATACACTCTGGTCCAGTAGATCCgaacacctcatatgtaatagttatgtgtgtgggtggggtggggtgtaCCATgtgcattgaaaataagttattttttatgttcttcacagaaaatgagccaaagccaatgagtttgagttagaataattaataaatagcataatgtttcttttagcaaacattgaaaatgggtcccacagacctgaacaccacacaagggttaatgtgaATAAAACTAACCTTTAGTGATTGTACTCTGTACTTCTGTAAAAGGGCATTCTCTTATGTTCTGTTCTTTCTGATTAAAGCTTCGCTCAGCATCTat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812192.1 True 1874 mRNA 0.45 4 7241820 7246413
XM_039812275.1 False 1836 mRNA 0.44 4 7241820 7246371
XM_039812356.1 False 1843 mRNA 0.44 4 7241820 7246365

Neighbor

gene id symbol gene type direction distance location
b3gnt2a NA coding downstream 17958 7158870 ~ 7223862 (-)
zgc:66455 NA coding downstream 86497 7140734 ~ 7155323 (-)
LOC120569746 NA coding downstream 446212 6795494 ~ 6795608 (-)
LOC120569800 NA coding downstream 447104 6794604 ~ 6794716 (-)
LOC120569742 NA coding downstream 447614 6794092 ~ 6794206 (-)
LOC120562943 NA coding upstream 3168 7249581 ~ 7255345 (-)
LOC120565143 NA coding upstream 46134 7292547 ~ 7307876 (-)
usp34 NA coding upstream 194657 7441070 ~ 7551615 (-)
xpo1a xpo1,LOC103359566 coding upstream 307619 7554032 ~ 7582024 (-)
LOC120569612 NA coding upstream 311354 7557767 ~ 7557898 (-)
G2392 NA non-coding downstream 73993 7166432 ~ 7167827 (-)
G2367 NA non-coding downstream 114411 7126802 ~ 7127409 (-)
G2362 NA non-coding downstream 155535 7085358 ~ 7086285 (-)
G2360 NA non-coding downstream 160352 7081247 ~ 7081468 (-)
trnae-uuc_9 NA non-coding downstream 198802 7042947 ~ 7043018 (-)
LOC120564702 NA non-coding upstream 17278 7263691 ~ 7268389 (-)
LOC120568064 NA non-coding upstream 25406 7271819 ~ 7276543 (-)
LOC120568185 NA non-coding upstream 187503 7433916 ~ 7441067 (-)
G2451 NA non-coding upstream 190061 7436474 ~ 7438272 (-)
G2743 NA non-coding upstream 385961 7632374 ~ 7633344 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 1670 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 218632 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 220175 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 224161 6999171 ~ 7017659 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 302833 6889288 ~ 6938987 (-)
LOC120569296 NA other upstream 85543 7331956 ~ 7372558 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 402429 7648842 ~ 7690587 (-)
G2752 NA other upstream 493411 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 689527 7935940 ~ 7957621 (-)
G2840 NA other upstream 960839 8207252 ~ 8209535 (-)

Expression


Co-expression Network