LOC120566437


Basic Information

Item Value
gene id LOC120566437
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 691340 ~ 696115 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812904.1
GGAGGAGTCAGGTGaacacagacagcagcagcatctgtCAGTGTCTGCTGATGAAGGTACCACGTCTCTTTGACCTCATCTGAACGGGACTTTAACAGCGGAGCAGCCTGACAGATATGGCTGCTGCAAACTACCTACAATctgaagatcagtttctgtgctccatctgtctgcATGTGTTCACTGATCCTGTCAGCACACCATGTGGTCACAACTTCTGCAAAAACTGCATCACTGAACACTGGAATACTAGTAACAGGTGCTTTTGTCCCATCTGTAAGGAGGGTTTTACCACAAGACCTGATTTGAGAATCAACACTTTCATCTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagctcagagcaacaagtgtccaaaccagtagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgacagcttcacgtctgaaaagacatcagctgatTGACCCTGTGGAGAACCTGGAAGGCAGGATGTGTATGAAGCACGATAAACCTCTGGAGCTGTTTTGTAAGACCGACcagacatgtgtctgcatgctctgcACTGTTGTAAACCACAAAACGCATGATGTTGTTCCTCTGAAAGAAGAATACGAAGAAAAGAAGGTAGAGCTGGGGAAGACAAAGGCTGAAATTCAGAAGATTATCCAGAAGAGACGACTGAAGATTCAGGATATCAAACACTCAGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttttctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacgACAGAAAAACAGGCTGAAGCTTTcatcaaagagctggaacaggaaatctctgagctgataaagagaagcactgaggtggagcagctcTCACGCTTTGAAGaccacctccatcttctccagatTGTCCAGGCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCATCCATAAATCATCTGAGGGGACTGTGGTGAAAGCTGTGGCtcagctggaggagacactcagtaaggagatgaagaagctgcttgaAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttGATCCCGATACAGCATATCCTAAactcatcctgtctgatgatGGGAAACAGGTGAATCATGGTGATGTGAGGAAGAATCTcccaaacaacccagagagatTTTCTAAGTGTGCTTGTGTTTTAGGAAAACAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTGAATGGGATTTAGGAGTGGTCAGAGAGTCGATCAACAGGAAGGGAGACATCACACTGAACCCACAGAAAGGTTACTGGACTATATGGTTGAGAAATAGAAATGAGTACAAAGCTCTTGCTGACCCTCGTGTCCTTCTCTCACTGAAGTCTCCTcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctcattttatgacgtagatgctgcagctcttatctactcctttactggctgctTCTTCACTGAGAAACTATTCCCATTCTTCAGTCCCTATAGGACTGAAGGTGATAAAAACTCTGCccctctgatcatctctcctgtcagagTAAACTAATCACTGATCTTATTTcatatattgatttattttcaatcaagggaacaaatgtatatattcatatattttacaTCGATTACATCGTAGTTTTGTCTGGTGACTGATTTACACTTTATTCCATTTATTATGATATGGTTAAATGTGCAGCAATTCTTTGCAAATTAAATCAAACTTCATCTTGACATATTTGGTGTCTTTAGAAACTGATTTCTTCTGGAAGTTATAATAAATGTCTGTGGTTTCAACAGTGGTTTAAATAGATGTAAATGCAAATTCATGTGTTGATGAATTATGAAGAGGTATATGGGGTAAGTTGGTtgtctgatgtttttgtttttttcctcattaATGAGACAGGAAAGAAAAAGTCTGAATTATTGTGGCATAATTGCAGAAATACAGTTTGTTTGTTGAGACTAAGAATGTTAATGGTGTTATTCCTAAATCAGTTCTTCTGATATCACTTTAATCTGCTGGTTTTGATCTTTCTAACAGTTGTaccttttacttttaaatgtaAGCCACTTTCCTATTTGGAGAACTTGCTGTTGCACTTATTATGAAATTGATCATTTAACGTGTTTAGACATAAtggttaaccctcctgttgtcatCGGGTCCATTTTCTACAAGTAAGTTATataagaaatttgggtttctatcaaccaaaatgtccaaaataataacgtggatggttccctacaacgctctccACAAGTGAAATAAATGACCAGTTCACTACta

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812904.1 True 2501 mRNA 0.42 2 691340 696115

Neighbor

gene id symbol gene type direction distance location
LOC120566792 NA coding upstream 10529 678822 ~ 680811 (+)
LOC120566787 LOC104946033 coding upstream 12584 647212 ~ 678756 (+)
LOC120566643 NA coding upstream 22172 664328 ~ 669168 (+)
LOC120566631 NA coding upstream 52333 622385 ~ 639007 (+)
LOC120566616 NA coding upstream 64875 622451 ~ 626465 (+)
LOC120566650 NA coding downstream 16871 712986 ~ 717671 (+)
LOC120566682 NA coding downstream 60310 756425 ~ 773725 (+)
LOC120566718 NA coding downstream 91987 788102 ~ 791905 (+)
LOC120566870 NA coding downstream 144547 840662 ~ 858533 (+)
LOC120566581 NA coding downstream 277690 973805 ~ 984586 (+)
G221 NA non-coding upstream 168351 522532 ~ 522989 (+)
G55 NA non-coding upstream 280878 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 304692 370651 ~ 386648 (+)
G49 NA non-coding upstream 322043 369028 ~ 369297 (+)
G48 NA non-coding upstream 345433 345628 ~ 345907 (+)
G270 LOC103372508 non-coding downstream 112446 808561 ~ 811947 (+)
G195 NA non-coding downstream 188992 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 195506 891621 ~ 892123 (+)
G281 NA non-coding downstream 271215 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 606598 1302713 ~ 1303535 (+)
G176 LOC104946033 other upstream 93133 583390 ~ 598207 (+)
G184 NA other upstream 209450 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 370561 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 466744 200413 ~ 224596 (+)
LOC120560058 NA other upstream 509037 158391 ~ 182303 (+)
LOC120566394 NA other downstream 12038 708153 ~ 753762 (+)
LOC120566368 NA other downstream 211725 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 230191 926306 ~ 1011615 (+)
G199 NA other downstream 320792 1016907 ~ 1019038 (+)
G292 NA other downstream 420509 1116624 ~ 1144413 (+)

Expression


Co-expression Network