LOC120566495


Basic Information

Item Value
gene id LOC120566495
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1341624 ~ 1347194 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813014.1
AAGGAGGAGAGTTTCAACGTCACACTCCAGAAATGAAAGTTAAGTTTGTCAGAGTGTCAGCCACGCTGCAGTAGAGACAagactctgtttctctctgaaagaaaactcaaactgactTCATCAGGTCTTTCTCAACAACACAGCAGAGTCTCTGCCAAACACTGATATGGCTGCTGCAAATTATCTGTCATctgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccTGTCGCCATACCATGTGGTCACAACTTCTGCAAGAGCTGCATCACTGATCACTGGAATATTAGTGACTGGTGCCAGTGTCCCTTATGTAAAGAGGCCTTTACCAGAAGACCTGATTTGAGGGTCAACACTTTCATCTCTGAGATGGTTGCTCAGTTCAGACGGTCAGTTCAACAGAAAGCCAGCAGAagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtcTCCTACTGTGAGACTCACCTGGAACCTCATCGGACAATGTCAGGCctgaaaagacatcagctgatcgATCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGACACATGATGTTGTTCCTCTGACAGAAGAATATGAAAGAAAGAAGGCAGAGCTGGGGAAGACAGAGGCTGAAATTCAGCAGATGATCCGGAAGAGACGACGGAAGATTCAGGAGGTCAAACACTCAGTCGACCTCAGTAaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcgacacgatcaaagagaagcagaaaacaacagagaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagaGAAGCACTGAGATGGAGCAGGTGTTAAGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAAGATCCAACGACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGTCCGTCCATCATCATATGAGGGGACTGTGGTGAAAGCTGTGGCtcagctggaggagacactCGTTAAACAGATGAAGAAGCAGCTACCTGAGTTTGAGCTGAAGAGGGTCCAGCAGTATGCAGTTGATGTGACTcttgatcctgatacagcacatcctgaactcatcctgtctgatgatGGGAGACAAGTGAATCATTGTGATGTATGGAAGACAATTCCAAACAGCAAAAAGAGATTTTCTTATCGTACTAGTGTTTTAGGAAAGCAGAGTTTCTCTTCAGGCAGATTGTACTTTGAGGTCCAAgttaaagaaaaaactaaatggaCTTTAGGAGTGGCCAGAGAGTCAATCAACAGAAAGGGAGACATCACACTGAGCACTGAGGATGGTTATTGGACGATATGGTTGAGAAAAGGAAATGAGTACAAAGCTTGTGCTGTCCCGCcagtccttctctctctgaagtgtcggcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactcttcccATTCTTCCATACTGGTAATAATGAAGGTGGTACAAACTCTGCccctctgatcatctctcctgtcagaATAAACTAATCACTGATCTCATTTCaggtattgatttattttcaatCAAGGGACCAAATGTACATATTCTTATATTTTACATCTTATTTTCTACAGAATCTGTTTCCTGTGGTGACTGATTTAGACTTTATTCCATGTATTATCATATGGTTAAATGTGCAGCAATTCTTTGCAAACTGAATCAAACTTCATCTTGACATATTTGGTGTCTTTATAAACTGATTTCTTCTGGAAGTTATAATAAATGTCTGTGGGTTTAACAGAGGTTTAAATAGATATCGTTCACATAACGTGTGTCCTGATGCATCAAATTAATGTGTTGATTATGTAATCAGATacacatttatttgtatttgatgtgcaaccacagaaaacatattgttgaatatttcattgtgtcatgaagcttcatttaagAGTGAGGCCTATTACATCCCATAGTGTCTAAAGAACACAGTATGTTTCATTATACCGGGTATGAAAAGTTAGGTAATGGATGTTTCTATCTTGTCTCAAAAGTGTTTTGGATAATTACTGGTCactttggtatttttttttctttcatgaaTTCTGTAAGATGGTTTATGAGTcaaagaaatctgtaaaatatgtGATTGTAGaataaaaactataaaataaaGTAGTTGTTGAACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813014.1 True 2464 mRNA 0.42 2 1341624 1347194

Neighbor

gene id symbol gene type direction distance location
LOC120566489 NA coding upstream 74359 1260019 ~ 1267265 (+)
LOC120566570 NA coding upstream 83520 1252768 ~ 1258104 (+)
LOC120566607 NA coding upstream 105651 1227358 ~ 1235973 (+)
LOC120560623 LOC104959125,LOC102294989,LOC102198497,LOC101481490 coding upstream 126018 1206918 ~ 1215606 (+)
LOC120566383 NA coding upstream 170359 1138078 ~ 1171265 (+)
LOC120566750 NA coding downstream 16763 1363957 ~ 1369052 (+)
LOC120566759 NA coding downstream 42575 1389769 ~ 1399264 (+)
LOC120566800 NA coding downstream 92646 1439840 ~ 1446325 (+)
LOC120566732 NA coding downstream 233120 1580314 ~ 1581696 (+)
polr3f polr3f,LOC102798306 coding downstream 631126 1978320 ~ 1986023 (+)
LOC120566887 NA non-coding upstream 38089 1302713 ~ 1303535 (+)
G195 NA non-coding upstream 146374 885107 ~ 1195250 (+)
G281 NA non-coding upstream 373104 967330 ~ 968520 (+)
LOC120566926 NA non-coding upstream 449501 891621 ~ 892123 (+)
G270 LOC103372508 non-coding upstream 529677 808561 ~ 811947 (+)
G309 NA non-coding downstream 4326 1351520 ~ 1352050 (+)
G310 NA non-coding downstream 6942 1354136 ~ 1354378 (+)
G321 LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945 non-coding downstream 35936 1383130 ~ 1383452 (+)
G322 NA non-coding downstream 37263 1384457 ~ 1384658 (+)
G317 NA non-coding downstream 53685 1400879 ~ 1403020 (+)
G149 LOC104959125,LOC105030654 other upstream 29193 1311867 ~ 1312431 (+)
G151 NA other upstream 122539 1193661 ~ 1219085 (+)
G165 NA other upstream 183065 1144654 ~ 1158559 (+)
G292 NA other upstream 197211 1116624 ~ 1144413 (+)
G199 NA other upstream 322586 1016907 ~ 1019038 (+)
G355 NA other downstream 189021 1536215 ~ 1536697 (+)
G369 NA other downstream 234844 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other downstream 246628 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other downstream 399377 1746571 ~ 1836460 (+)
LOC120566000 NA other downstream 598951 1946145 ~ 1967255 (+)

Expression


Co-expression Network