LOC120566581


Basic Information

Item Value
gene id LOC120566581
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 973805 ~ 984586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813100.1
GAGtcgcttttaaaaaaaaaacgtatagcCCAGCTAAGCAATGTCTGTCAGTAGCTAAACTTTACTCAGAGATGTTTGTCTGAAAAagTCAGATGAGTTTCAACCTCCTCGCCTGACTTAGCAGCGACTTTAGGAGAGAGGCAAATGAAAGACCAGAACGTTACCGGACAAACAGCTGAGCTGAGCCGTGGACGGACACATGCGTGTAACTGTAACCATGTGAGAACCTGAAGGAGGAAACACACGAGCTCCCAAACAGAGcagcagaaagacagaaagaggaggagcaacgccggaaggaggagagagactcGACGTCACTCTCCAGAAATGAAACTTAGTGTCTGTCAGAGGGAGCTGCAGTCGAGACCAGTCTCTGGGTCTCTGTCTGGAGAAATATAGAGCTGAGTTCATCAGGTCTTCGCTCAACAAGTACCGATATGGCTGCTGTGAGCTGTCTGCTGTctgaagatcagtttctgtgctccatctgtctgAATTTGTTCACGGATCCTGTCAGCACACCATGTGGACACAACTTCTGCAAGAACTGCATCACTGATCGCTGGGATGTTAATTACAGGTGCCAGTGTCCCCTGTGTAAGGAGGCTTTTACCACAAGACCTGATTTGAGGGTCAACACTTTGTTCTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggacccaaactgaaggccctgaagtcctgcctagtgtgtctggtctcctactgtgagattcacctggagcctcatctgacagcttcacgtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACTAAGCACGATAAAcctctggagctgttctgtaagacCGACCAGACATGTGTCTGCACACACTGTCCTGCTTTAGACCACAAGACCCATGAGTttgttcctctgaaagtggaatATGAAGAAAAGAAGGGAGATTTGATGAAGACAGATGCTGAAATTCagcagatgatccagaagagacgaCTGAAGGTTCAGGAAATCAAACTCTCAGTGAAGCGTAGTAAGGAAAAAACGCACATGGAGGTAGCAGAAGGTGTTCGGGTTTTCTCTTCCCTGAAGCAGTCTGTTGAGAGAGGCCTGAATGAGCTCATCAAAACGATAGAAGAGAAGCAGAAAAGGACACAAAAACAGGCCGACGCTTTcatcaaagagctggaacaggaaatctctgagctgaAGAAGAGGAGCACTGAGCTGGAGCAGGTGTTACGCTCTGAAGACCACGTTCACCTCCTGCAAAGTTTCCCGTCCTTAAAAGATGCTCCACCCACCAAAGACTGGACATACGTCAACGTCCGCCCACCATCATTTGAGGGGATTTTGAGCATAGCTGTGAAtcagctggaggagacactCAGTAAACAGATGCAGAAGCTGCTTGTTGAGTCTGAGCTGAGGAAGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaCATCCTGAACTCTTCCTCTCTCACAATGGGAAACAGGTGAATCATGGTGATGTAGAGAAGAATCTCCCAGACAACCCAGAGAGATTTTCCCATTATAATTTTGTTTTAGGAAAACAGAGTTTCTCTTCAGGCAGATTTTACTTCGAGGTTCAAGTCAAAGGGAAGCCTAAATGGAATATAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGGACTAATCAGAATGACACCTGACGACGGTTTCTGGACGATATGGTTGAGAAATGGAAATGAGTACAAAGCTCTAACTGTCCCTTcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactccTCCCATTCTTCAGTCCCTGTAGGAATGATGGTGGGGAAAACTCTGCCCCTCTGATCATCTCTCGTGTCAATAAAACTGCCTGATCAGTGGAGGTTTTTCGGCAGTGATCCAGAATTAACATCATTTAATGGTGTGGAGATGGTTAAAACATTcagagttttgttttgttttttgtttttatatctgCCGAGAATCCGTGGAAAATTCTGCAGAATTATGCGTCCGCAGAGTCCCTGTGGCCTCGCTGACCAATTAAGcaatagtctggatcaacggaagtacatttccaggataattgatttcttctgctctctgtgtgttgccgttctcaaactcagACTTCTTttcagaaaacaacaacaaactttgagcaagCGAGCTACagtacacactgaaaatggcatgttttaaagcaaatttggatcgtgcaacaaggcagaccTGCCCGGTTCGTGGTTTTGGGAGCGATTGGTGGGATTtctgtggacaaagtacacacggcgatacactgatAAGAGCCAGGTTTAACCATGTTTAGCCAGACTTATCTCGAGACTAATTGAGCAATAACATTGAATCATTGCCAATAAGACATATACTTACATTGTAAATATGTACCAGACAAAGTTTTTATAATACAGTACTGACACAGCAGTCAATACCAGGACGCTGATGGATTAGAGACACAAAAGCAAAGATTTCTTGTCACTTATGGCAACATAAGTTCAGCGGTAATGCACAGTGTTTTCATCTGAATATGTTGGGTCATTGTTTATCGTTTGTGTCATTGTGTCGTACAGATTCAGGATTTGAACATGAACTGAAGGAGTTCAGTTTGTGTTGCTGTTAAAACGgtggatttgtttttaattctaaggctttttaaagagaaaatatACTTCTACGTATAATCTGTTAAACTCAACAATGTAGTGATGAATAATATTGATTTTAGTTTGTTAATTACTCAACTGTGGATACAATCATTATCACattattttattgtgtttgCCTTTAGGCTCTGGCTTGTTTAAATTGCTATTTCTCTGAATTACATCCTGTAACTTTGCtcccatttattttgttttttggttagttgatttaaaggtgcagtaagtgatTGTTGGTATTTGAACTTAACTGCTGAA
>XM_039813108.1
ATGTTACTTCGAGtcgcttttaaaaaaaaaacgtatagcCCAGCTAAGCAATGTCTGTCAGTAGCTAAACTTTACTCAGAGATGTTTGTCTGAAAAagATGAGTTTCAACCTCCTCGCCTGACTTAGCAGCGACTTTAGGAGAGAGGCAAATGAAAGACCAGAACGTTACCGGACAAACAGCTGAGCTGAGCCGTGGACGGACACATGCGTGTAACTGTAACCATGTGAGAACCTGAAGGAGGAAACACACGAGCTCCCAAACAGAGcagcagaaagacagaaagaggaggagcaacgccggaaggaggagagagactcGACGTCACTCTCCAGAAATGAAACTTAGTGTCTGTCAGAGGGAGCTGCAGTCGAGACCAGTCTCTGGGTCTCTGTCTGGAGAAATATAGAGCTGAGTTCATCAGGTCTTCGCTCAACAAGTACCGATATGGCTGCTGTGAGCTGTCTGCTGTctgaagatcagtttctgtgctccatctgtctgAATTTGTTCACGGATCCTGTCAGCACACCATGTGGACACAACTTCTGCAAGAACTGCATCACTGATCGCTGGGATGTTAATTACAGGTGCCAGTGTCCCCTGTGTAAGGAGGCTTTTACCACAAGACCTGATTTGAGGGTCAACACTTTGTTCTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggacccaaactgaaggccctgaagtcctgcctagtgtgtctggtctcctactgtgagattcacctggagcctcatctgacagcttcacgtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACTAAGCACGATAAAcctctggagctgttctgtaagacCGACCAGACATGTGTCTGCACACACTGTCCTGCTTTAGACCACAAGACCCATGAGTttgttcctctgaaagtggaatATGAAGAAAAGAAGGGAGATTTGATGAAGACAGATGCTGAAATTCagcagatgatccagaagagacgaCTGAAGGTTCAGGAAATCAAACTCTCAGTGAAGCGTAGTAAGGAAAAAACGCACATGGAGGTAGCAGAAGGTGTTCGGGTTTTCTCTTCCCTGAAGCAGTCTGTTGAGAGAGGCCTGAATGAGCTCATCAAAACGATAGAAGAGAAGCAGAAAAGGACACAAAAACAGGCCGACGCTTTcatcaaagagctggaacaggaaatctctgagctgaAGAAGAGGAGCACTGAGCTGGAGCAGGTGTTACGCTCTGAAGACCACGTTCACCTCCTGCAAAGTTTCCCGTCCTTAAAAGATGCTCCACCCACCAAAGACTGGACATACGTCAACGTCCGCCCACCATCATTTGAGGGGATTTTGAGCATAGCTGTGAAtcagctggaggagacactCAGTAAACAGATGCAGAAGCTGCTTGTTGAGTCTGAGCTGAGGAAGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaCATCCTGAACTCTTCCTCTCTCACAATGGGAAACAGGTGAATCATGGTGATGTAGAGAAGAATCTCCCAGACAACCCAGAGAGATTTTCCCATTATAATTTTGTTTTAGGAAAACAGAGTTTCTCTTCAGGCAGATTTTACTTCGAGGTTCAAGTCAAAGGGAAGCCTAAATGGAATATAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGGACTAATCAGAATGACACCTGACGACGGTTTCTGGACGATATGGTTGAGAAATGGAAATGAGTACAAAGCTCTAACTGTCCCTTcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactccTCCCATTCTTCAGTCCCTGTAGGAATGATGGTGGGGAAAACTCTGCCCCTCTGATCATCTCTCGTGTCAATAAAACTGCCTGATCAGTGGAGGTTTTTCGGCAGTGATCCAGAATTAACATCATTTAATGGTGTGGAGATGGTTAAAACATTcagagttttgttttgttttttgtttttatatctgCCGAGAATCCGTGGAAAATTCTGCAGAATTATGCGTCCGCAGAGTCCCTGTGGCCTCGCTGACCAATTAAGcaatagtctggatcaacggaagtacatttccaggataattgatttcttctgctctctgtgtgttgccgttctcaaactcagACTTCTTttcagaaaacaacaacaaactttgagcaagCGAGCTACagtacacactgaaaatggcatgttttaaagcaaatttggatcgtgcaacaaggcagaccTGCCCGGTTCGTGGTTTTGGGAGCGATTGGTGGGATTtctgtggacaaagtacacacggcgatacactgatAAGAGCCAGGTTTAACCATGTTTAGCCAGACTTATCTCGAGACTAATTGAGCAATAACATTGAATCATTGCCAATAAGACATATACTTACATTGTAAATATGTACCAGACAAAGTTTTTATAATACAGTACTGACACAGCAGTCAATACCAGGACGCTGATGGATTAGAGACACAAAAGCAAAGATTTCTTGTCACTTATGGCAACATAAGTTCAGCGGTAATGCACAGTGTTTTCATCTGAATATGTTGGGTCATTGTTTATCGTTTGTGTCATTGTGTCGTACAGATTCAGGATTTGAACATGAACTGAAGGAGTTCAGTTTGTGTTGCTGTTAAAACGgtggatttgtttttaattctaaggctttttaaagagaaaatatACTTCTACGTATAATCTGTTAAACTCAACAATGTAGTGATGAATAATATTGATTTTAGTTTGTTAATTACTCAACTGTGGATACAATCATTATCACattattttattgtgtttgCCTTTAGGCTCTGGCTTGTTTAAATTGCTATTTCTCTGAATTACATCCTGTAACTTTGCtcccatttattttgttttttggttagttgatttaaaggtgcagtaagtgatTGTTGGTATTTGAACTTAACTGCTGAACCAATACAACCCCCCCTTCAGAAGCTCCGCCCCCCAGATTCATCGACAGACAACTACTGGCCGGCCGGCCGCCACATTCACATGCTCCATTCATAGAAAATAGAGAGCTAGGGGACCATAAGGAGATATTccctgaatttgacaaaaagtgtattggattaacatcacttactATACTTTTAAGTTAATTAGTCAATGTAAAATAGTCaaaaaatagtaaaatagtTGAACGAACACCTGGGTGAAAGTAACATGTTTGACCCAAACATTCATCCCGGACATTAGGTaagcatgcatgtgtatgtatgcatatgcATGTGTCTGAATACTTGTAACGTGGCTTATGAATCATAGAAATCTGTAAATATGAGAGTTGTATGcatgtgtaaaacaaaaaaactgtaaaataaaccGGTTGTTGAACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813100.1 False 3152 mRNA 0.44 3 973815 984158
XM_039813108.1 True 3586 mRNA 0.43 3 973805 984586

Neighbor

gene id symbol gene type direction distance location
LOC120566870 NA coding upstream 115272 840662 ~ 858533 (+)
LOC120566667 NA coding upstream 166762 632750 ~ 807043 (+)
LOC120566718 NA coding upstream 181900 788102 ~ 791905 (+)
LOC120566682 NA coding upstream 200080 756425 ~ 773725 (+)
LOC120566650 NA coding upstream 256134 712986 ~ 717671 (+)
LOC120566725 NA coding downstream 82112 1066698 ~ 1072641 (+)
LOC120566475 NA coding downstream 108433 1093019 ~ 1103529 (+)
LOC120566383 NA coding downstream 153492 1138078 ~ 1171265 (+)
LOC120566742 NA coding downstream 164420 1149006 ~ 1150498 (+)
LOC120560623 LOC104959125,LOC102294989,LOC102198497,LOC101481490 coding downstream 222332 1206918 ~ 1215606 (+)
G281 NA non-coding upstream 5285 967330 ~ 968520 (+)
LOC120566926 NA non-coding upstream 81682 891621 ~ 892123 (+)
G270 LOC103372508 non-coding upstream 161858 808561 ~ 811947 (+)
G261 NA non-coding upstream 281576 686445 ~ 692229 (+)
G221 NA non-coding upstream 450816 522532 ~ 522989 (+)
LOC120566887 NA non-coding downstream 318127 1302713 ~ 1303535 (+)
G309 NA non-coding downstream 366934 1351520 ~ 1352050 (+)
G310 NA non-coding downstream 369550 1354136 ~ 1354378 (+)
G321 LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945 non-coding downstream 398544 1383130 ~ 1383452 (+)
G322 NA non-coding downstream 399871 1384457 ~ 1384658 (+)
LOC120566394 NA other upstream 220043 708153 ~ 753762 (+)
G176 LOC104946033 other upstream 375598 583390 ~ 598207 (+)
G184 NA other upstream 491915 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 653026 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 749209 200413 ~ 224596 (+)
G199 NA other downstream 32321 1016907 ~ 1019038 (+)
G292 NA other downstream 132038 1116624 ~ 1144413 (+)
G165 NA other downstream 160068 1144654 ~ 1158559 (+)
G151 NA other downstream 209075 1193661 ~ 1219085 (+)
G149 LOC104959125,LOC105030654 other downstream 327281 1311867 ~ 1312431 (+)

Expression


Co-expression Network