LOC120566607


Basic Information

Item Value
gene id LOC120566607
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1227358 ~ 1235973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813143.1
GGAAAGAAGAGAGCAACAACGTCACACTCCAGAAATGAAAGTTAAGTTTGTCAGAGTGTCAGCCACGCTGCAGTAGAGACAagactctgtttctctctgaaagaaaactcaaactgactTCATCAGGTCTTTCTCAACAACACAGCAGAGTCTCTGCCAAACACTGATATGGCTGCAGAAAACTATCTGCAATCTGAAGATCAAtttctgtgctccatctgtctCGATGTGTTCACTGATCCTGTCACCATTCCATGTGGTCACAACTTCTGCAAGAACTGCATCACTGACCATTGGAATACTAATGACCAGTACCTGTGTCCAATGTGTGAAGAGGCTTTTACCACAAGACCTGATTTGAGGGTCAACGCTTTCATTTCTGAGATGGTTGCTCAGTTCCGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagaatcacctggagcctcatctgaCAACGTCCGGCctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAGGGCAGGATGTGTACGAAGCATGATAAAcctctggagctgttctgtaagactgaccagacatgtgtctgcatgctctgcACTGTTTTAGAGCACAAGATGCATGATGTTGTTCCAATAAAGGAAGAATATGAAGGAAAGAAGGCAGAGTTGGGGAAGACCGAGGCGGAAATTCagcagatgatccagaagagacgaCTGAAGATTCAGGAGGTCAAACACTCAGTCGAcctcagtgaggaagatgcagatagagagatagcagaaggtgttcaggtcttcactTCTCTGATGGAGTCTGTTGAGAAAGGCCTGAATGAGCTCATCAACAcgatcaaagagaagcagaaaacaacagaaaaacaggctgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagaGTAGCAGTGAGGTGGAGCAGATCTCACACTCTGAAGaccacctccatcttctccagacTGTCCAGTCCGTAACAATCAACCACCCTGCACCCACCAAGGACTGGACAAAGGTCATCGTCCATCAATCATATGAGGGGACTGTGGTGAAAGCTGTGGCTCAGCTGGAAGAGACACTCAGTAaagagatgaagaagctgcttgaAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaCATCCTTGTCTTATCCTGTCTGATGATGGGAAACAAGTATATCCTGGTGGTGGAAAAAAGAATCTTCAAGATAACCCAGAGAGATTTTCTCTTAATCGCTTTGTTTTAGGAAGGCAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAAATGGGATTTAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGCAAGCATACCACTGAACCCAAGGTATGGTAATTGGACTATATGGTTGAGAAATGGATTTGAGTACAAAGCTCTTGATGTCCCTCcagtccttctctctctgaagtctcaacctcagaaggtgggggtgtttgtgaaTTATGAGGCGGGTCTGGTCTCCTTTTTTGACGTAAATGCTGCAGCCcttatctactcctttactggctgcttcttcactgagaaactcttcccGTTTTTCAGTCCCTGTAAGAATGAAGGTGGTGAAAACAGTGCAcctctgatcatctctcctgtcaATTACATTGAGTAGGCTAATCACTAAAACACCAAATATGTCAAGCTGAAGTTTGAGTAAAATTGCAAAAGATGCTGCAAAAATATcttgatttatttgtatttgatgTAGCCACAGAAAACATATTGCTGAATATTTCATTGTGTCATTAAGCTTCATTCATTTCATGTATTATTTAAGTAAGGCTTCATACATCCtatagtgtctacagaacacaGTATGTGTTGCTGTTATACCGGGTATAAAAAGTTAGTTATTTGGTTAATTACTGGTCGCTTTGGCCgttttttggtgttttgtgATTACTGATAAAAAGGCATATGAGTCAAATCTGTAAATACGtgattgtaaaa
>XM_039813152.1
GTAAAGTGCAGTCGAGAcaagtctctgtgtttctgtctgaagCAATATTGAACTGAGTTCGTCAGGTCTTTCTCAACATTTACCGATATGGCTGCAGAAAACTATCTGCAATCTGAAGATCAAtttctgtgctccatctgtctCGATGTGTTCACTGATCCTGTCACCATTCCATGTGGTCACAACTTCTGCAAGAACTGCATCACTGACCATTGGAATACTAATGACCAGTACCTGTGTCCAATGTGTGAAGAGGCTTTTACCACAAGACCTGATTTGAGGGTCAACGCTTTCATTTCTGAGATGGTTGCTCAGTTCCGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagaatcacctggagcctcatctgaCAACGTCCGGCctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAGGGCAGGATGTGTACGAAGCATGATAAAcctctggagctgttctgtaagactgaccagacatgtgtctgcatgctctgcACTGTTTTAGAGCACAAGATGCATGATGTTGTTCCAATAAAGGAAGAATATGAAGGAAAGAAGGCAGAGTTGGGGAAGACCGAGGCGGAAATTCagcagatgatccagaagagacgaCTGAAGATTCAGGAGGTCAAACACTCAGTCGAcctcagtgaggaagatgcagatagagagatagcagaaggtgttcaggtcttcactTCTCTGATGGAGTCTGTTGAGAAAGGCCTGAATGAGCTCATCAACAcgatcaaagagaagcagaaaacaacagaaaaacaggctgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagaGTAGCAGTGAGGTGGAGCAGATCTCACACTCTGAAGaccacctccatcttctccagacTGTCCAGTCCGTAACAATCAACCACCCTGCACCCACCAAGGACTGGACAAAGGTCATCGTCCATCAATCATATGAGGGGACTGTGGTGAAAGCTGTGGCTCAGCTGGAAGAGACACTCAGTAaagagatgaagaagctgcttgaAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttgatcctgatacagcaCATCCTTGTCTTATCCTGTCTGATGATGGGAAACAAGTATATCCTGGTGGTGGAAAAAAGAATCTTCAAGATAACCCAGAGAGATTTTCTCTTAATCGCTTTGTTTTAGGAAGGCAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAAATGGGATTTAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGCAAGCATACCACTGAACCCAAGGTATGGTAATTGGACTATATGGTTGAGAAATGGATTTGAGTACAAAGCTCTTGATGTCCCTCcagtccttctctctctgaagtctcaacctcagaaggtgggggtgtttgtgaaTTATGAGGCGGGTCTGGTCTCCTTTTTTGACGTAAATGCTGCAGCCcttatctactcctttactggctgcttcttcactgagaaactcttcccGTTTTTCAGTCCCTGTAAGAATGAAGGTGGTGAAAACAGTGCAcctctgatcatctctcctgtcaATTACATTGAGTAGGCTAATCACTAAAACACCAAATATGTCAAGCTGAAGTTTGAGTAAAATTGCAAAAGATGCTGCAAAAATATcttgatttatttgtatttgatgTAGCCACAGAAAACATATTGCTGAATATTTCATTGTGTCATTAAGCTTCATTCATTTCATGTATTATTTAAGTAAGGCTTCATACATCCtatagtgtctacagaacacaGTATGTGTTGCTGTTATACCGGGTATAAAAAGTTAGTTATTTGGTTAATTACTGGTCGCTTTGGCCgttttttggtgttttgtgATTACTGATAAAAAGGCATATGAGTCAAATCTGTAAATACGtgattgtaaaa

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813143.1 True 2153 mRNA 0.44 2 1231863 1235973
XM_039813152.1 False 2072 mRNA 0.44 2 1227358 1235973

Neighbor

gene id symbol gene type direction distance location
LOC120560623 LOC104959125,LOC102294989,LOC102198497,LOC101481490 coding upstream 11752 1206918 ~ 1215606 (+)
LOC120566383 NA coding upstream 56093 1138078 ~ 1171265 (+)
LOC120566742 NA coding upstream 76860 1149006 ~ 1150498 (+)
LOC120566475 NA coding upstream 123829 1093019 ~ 1103529 (+)
LOC120566725 NA coding upstream 154717 1066698 ~ 1072641 (+)
LOC120566570 NA coding downstream 16795 1252768 ~ 1258104 (+)
LOC120566489 NA coding downstream 24046 1260019 ~ 1267265 (+)
LOC120566495 NA coding downstream 105651 1341624 ~ 1347194 (+)
LOC120566750 NA coding downstream 127984 1363957 ~ 1369052 (+)
LOC120566759 NA coding downstream 153796 1389769 ~ 1399264 (+)
G195 NA non-coding upstream 32108 885107 ~ 1195250 (+)
G281 NA non-coding upstream 258838 967330 ~ 968520 (+)
LOC120566926 NA non-coding upstream 335235 891621 ~ 892123 (+)
G270 LOC103372508 non-coding upstream 415411 808561 ~ 811947 (+)
G261 NA non-coding upstream 535129 686445 ~ 692229 (+)
LOC120566887 NA non-coding downstream 66740 1302713 ~ 1303535 (+)
G309 NA non-coding downstream 115547 1351520 ~ 1352050 (+)
G310 NA non-coding downstream 118163 1354136 ~ 1354378 (+)
G321 LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945 non-coding downstream 147157 1383130 ~ 1383452 (+)
G322 NA non-coding downstream 148484 1384457 ~ 1384658 (+)
G151 NA other upstream 8273 1193661 ~ 1219085 (+)
G165 NA other upstream 68799 1144654 ~ 1158559 (+)
G292 NA other upstream 82945 1116624 ~ 1144413 (+)
G199 NA other upstream 208320 1016907 ~ 1019038 (+)
LOC120566368 NA other upstream 214489 907840 ~ 1012869 (+)
G149 LOC104959125,LOC105030654 other downstream 75894 1311867 ~ 1312431 (+)
G355 NA other downstream 300242 1536215 ~ 1536697 (+)
G369 NA other downstream 346065 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other downstream 357849 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other downstream 510598 1746571 ~ 1836460 (+)

Expression


Co-expression Network