LOC120566650


Basic Information

Item Value
gene id LOC120566650
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 712986 ~ 717671 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813219.1
CTGTCAGAGGGAGCTGCAGTCGAGAccagtctctgtgtctctgtctgaagAAATATTGAACTGAGCGTCAGGTCTTTCTCAACAAATACCGATATGGCTGCTGCAAACTATCTGCCATctgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccTGTAACCATACCATGTGGTCACAACTTCTGCAAAAACTGCATCACTGATCACTGGAATACTAATGACCAGCACCTGTGTCCGATGTGTAAAACGTTTTTCAACACAAGACCTGAACTGCACGTCAACGCTTTCATCTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtcTCCTACTGTGAGACTCAACTGGAGCCTCATCTAACCATGTCAAGCCTGAAAACACATCAGATGATCGACCCTGTGGAGAACGTGGAAGGCAGGATTTGTACGAAGCACGATAAAcctctggagctgttctgtaagacCGACCAGAAATATGTCTGCATGCTCTGCACTGTTTTAGACCATAAGACGCATGATGTTGTTCCTCTGACAGAAGGATATGAAGGAAagaaggcagagctggaggctGAAATTCAGCAGATGATCCAAAAGAGACAACTGAAGATTCAGGAGATCAAACACTCAGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggccgaaggtttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAACATCCAACAACTTCCACCCACCAAGGACTGGACAGAGATCAGCGTCCGTCCATCATCATATGAGGGGAATGTGGTGAAAGCTGTGGTTCAACTGGAGGAGACACTCAGTAaagagatgaagaagctgctccctgagctgaagagggtccagcagtatgcagtggatgtgactcttgatcctgatacagcaCAATCATTtctcatcctgtctgatgatGGGAAACAAGTGAATCTTGGTGATGTGATGAAGAATCTCCCAGACAACCCAGAGAGATTTTCTaagtgtgttagtgttttaggAAAGCAGAGTTTCTCTTCAGCCAGATTTTACTTTGAGGTTCAAGTGAAAGGAAAGACTAATTGGGATTTAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGGAAGAATCACAGTGAGTCCTCAGAATGGTTACTGGGCTGTATGGTTGAGAAATGGAAATGAGTCCTACGCTCTTGATGACCCTGCTGTCCGtctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactcttcccATTCTTCCGTCCTAGTAGTAATGAAGGTGGTAAAAACTCTGCCCCTCTGATCATCTCTTCTGTCAGAGTAAACTAATCACTGATCTCATTTCaggtattgatttattttcaatCAAGAGATCGAATGTACATATTCATATTTTACATCTCATTTTCTACAGAATCTGTTTCCTGTGGTGATTGATTTACACTTTATTCCATTTATTATCATATGGTTAAATGTGCTGCAATTCTTTGCAAATTAAATCAAACTTCATCTTGACATATTTGGTGTCTTTAGAAAACTGATTTCTTCTGGAAGTTATAATAAATGTCTGTGGGTTTAACAGAGGTTTAAATAGATATTGTCCACATAACGTGTGTCATGATGCATCAAATTCATGTGTTGATGATTGAAGACTAGTAACAAAGAAATTGCAGATATCCACAAATGGAGAaaactgatttttattttattttaaatatctaAAATTAAAGGGGGGACAATTAGGATCTAAGAGGTATATGGTGTAAATTGGTTGtctgatgttttatttgttatattCCTCAATAATGAGACAGGAAAGAAAAAGTCTGAATTATTGTGGCATAATTGCAGAAATAAAGTCTGTTTGTTGAGACCAAGAATGTTAATGGTGTTATTCCTAAATCAGTTCTTCTGATATCACTTTAAACTGCTGGTTTTGTTCTTTCTACCACAACATGTAAGCCACTTTCCTATTTGGAGAAACTGCTGTTGCACTTATTATAAAATTGATAATTTCAAGCGTTTAGACATAATGGTTAACCCTCCTGTTCCTTGGGTCCATTTTCTAATATAtaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813219.1 True 2476 mRNA 0.42 2 712986 717671

Neighbor

gene id symbol gene type direction distance location
LOC120566437 NA coding upstream 16871 691340 ~ 696115 (+)
LOC120566792 NA coding upstream 32175 678822 ~ 680811 (+)
LOC120566787 LOC104946033 coding upstream 34230 647212 ~ 678756 (+)
LOC120566643 NA coding upstream 43818 664328 ~ 669168 (+)
LOC120566631 NA coding upstream 73979 622385 ~ 639007 (+)
LOC120566682 NA coding downstream 38754 756425 ~ 773725 (+)
LOC120566718 NA coding downstream 70431 788102 ~ 791905 (+)
LOC120566870 NA coding downstream 122991 840662 ~ 858533 (+)
LOC120566581 NA coding downstream 256134 973805 ~ 984586 (+)
LOC120566725 NA coding downstream 349027 1066698 ~ 1072641 (+)
G261 NA non-coding upstream 20757 686445 ~ 692229 (+)
G221 NA non-coding upstream 189997 522532 ~ 522989 (+)
G55 NA non-coding upstream 302524 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 326338 370651 ~ 386648 (+)
G49 NA non-coding upstream 343689 369028 ~ 369297 (+)
G270 LOC103372508 non-coding downstream 90890 808561 ~ 811947 (+)
G195 NA non-coding downstream 167436 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 173950 891621 ~ 892123 (+)
G281 NA non-coding downstream 249659 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 585042 1302713 ~ 1303535 (+)
G176 LOC104946033 other upstream 114779 583390 ~ 598207 (+)
G184 NA other upstream 231096 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 392207 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 488390 200413 ~ 224596 (+)
LOC120560058 NA other upstream 530683 158391 ~ 182303 (+)
LOC120566368 NA other downstream 190169 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 208635 926306 ~ 1011615 (+)
G199 NA other downstream 299236 1016907 ~ 1019038 (+)
G292 NA other downstream 398953 1116624 ~ 1144413 (+)
G165 NA other downstream 426983 1144654 ~ 1158559 (+)

Expression


Co-expression Network