LOC120566667


Basic Information

Item Value
gene id LOC120566667
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 632750 ~ 807043 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813240.1
CTGCAGTAGAGAcaagtctctgtttctctctgaaagaaaactcaaactgactTCATCAGGTCTTTCTCAACAACACAGCAGAGTCTCTGCCAAACAGTGATATGACTGCTGTGAGCATTCGGTCATctgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccTGTCAGCACACCATGTGGTCACAACTTCTGCAAAAACTGCATCACTGAACACTGGAATACTAATGACCAGTACCTGTGTCCGATGTGCAAAAAGGTTTTCAACACAAGACCTGAGCTGCATGTCAACACTTTCATCTCTGAGATGGTCGCTCAGTTCAGACAGTCAGCGCAACAGAAAGccggcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacatctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgaCAACGTCAGGCctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGGAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGACTCATGATGTTGTTCCTCTGAAAGAAGGATATGAAGGAAAGAAGATAGAGCTGAGGAAGACAGAGGATGAAATTAagcagatgatccagaagagacgactgaagattcaggagatcaaacactcagtcgacctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttccctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggctgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGTCCGTCCATCATCATATGAGGGGACTGTGGTTAAAGCTGTGGTtcagctggaggagacactCAGTAAAGAGATCAAGAAGCTGCTCCCTGAGtctgagctgaagagggtccagcagtatgcagtggatgtgactcttgatcctgatacagcaTTTCCCTATCTCATCCTGTCTGATAATGGAAAACATGTGACTGATGGTGATGTGAGGAAGAATCTCCCAGACAACCCAGAGAGATTTTCTCATTATCGTGGTGTTTTAGGAAAGCAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAGATGGAGTTTAGGAGTGGCCAGAGAGTCGGTCAACAGGAAGGGAAACATCACACTGAGCCCTGAGGATGGTTACTGGGCTATACGGTTGAGAAATGAGTACTACGCTGCTGCTGACCCTGATGTCCAtctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctctttcactgagaaactcttcccATATTTCAGTCCAAGCATTAGTGATGGTGGTAAAAACTCTGCCCCctgatcatctctcctgtcagagTAAACTAATCACTGATCTCAtttgacctctctctctctctctttctctctctctctctgtattgatttattttaagtCAAGGAACAGATTGTACATATTCATATTTTCGTCTTCTTTTCTACAGAATCGGTTTCTTGTGGTGACTGATTTACACTTTATTCCATTTATTATCATATGGTTAAATGTGCAGCAATTCCTTACAAATTGAATCAAACTTCATCTTGACATATTTGGTGTCTTTAGTAACTGATTTCTTCTGGAAGTTATAATGAATGTCTTTGGGTTTAAATAGATATTGTCCACATAACGTGTGTCATGATGCATCAAATTAATGTGATGAATTATGACTAGAAACAAAGCAATTGCAGATATccgcaaatggagaaaacacaaatgtttgtgttttttctcattttaaatatgtaaaattaaaaaaggtaAAGTGCATATCTGATGGGGCAATTAGGATCTAAGAGGTATATGGTGTGAATTGGTTGTCGgatgttattttttatattccTTAATGTGACAGGAAAGAGTCTGAATTATTGTGGCATATTTGCAGAAATAAAGTTTGTTTGTTGATACCAAGAA
>XM_039813248.1
ATATGACTGCTGTGAGCATTCGGTCATctgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccTGTCAGCACACCATGTGGTCACAACTTCTGCAAAAACTGCATCACTGAACACTGGAATACTAATGACCAGTACCTGTGTCCGATGTGCAAAAAGGTTTTCAACACAAGACCTGAGCTGCATGTCAACACTTTCATCTCTGAGATGGTCGCTCAGTTCAGACAGTCAGCGCAACAGAAAGccggcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacatctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtctcctactgtgagactcacctggagcctcatctgaCAACGTCAGGCctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGGAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGACTCATGATGTTGTTCCTCTGAAAGAAGGATATGAAGGAAAGAAGATAGAGCTGAGGAAGACAGAGGATGAAATTAagcagatgatccagaagagacgactgaagattcaggagatcaaacactcagtcgacctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttccctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggctgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGTCCGTCCATCATCATATGAGGGGACTGTGGTTAAAGCTGTGGTtcagctggaggagacactCAGTAAAGAGATCAAGAAGCTGCTCCCTGAGtctgagctgaagagggtccagcagtatgcagtggatgtgactcttgatcctgatacagcaTTTCCCTATCTCATCCTGTCTGATAATGGAAAACATGTGACTGATGGTGATGTGAGGAAGAATCTCCCAGACAACCCAGAGAGATTTTCTCATTATCGTGGTGTTTTAGGAAAGCAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAGATGGAGTTTAGGAGTGGCCAGAGAGTCGGTCAACAGGAAGGGAAACATCACACTGAGCCCTGAGGATGGTTTCTGGACTATATGGTTGAGAAATGGAAATGAGTACAAAGCTCTAGCTGGCCCTGGTGTCCTCTCTCTGAAGTCTCCTcctcagaaggtgggggtgtttatggattatgaggagggtctggtctcctttCATGACGTAGATACTGCAGctcttatctactcctttactggctgctacttcactgagaaactcttcccATACTTCTGTCCCTATTTGAATGATGGTGGTAAAAACTCTGCCCCActgatcatctctcctgtcCTGTCTGATCTCATTTcatatattgatttattttaaatcaagGGAACAAATGTACATATTCATACATTTTACGTCTTATTTTCTACAGAATCTGTTTCCTGTGGTGACTGATTTACACTTTATTCCATTTATTATCATATGGTTAAATGTGCAAATTCTTTGCAAATTGAATCAAACTTCAACTTGACATATTTGGTGTCTTTGGAAACTGATTTCTTCTGGAAGTTATAATAAATGTTTGTGGGTTTAACAGAGGTTTTAATAGATAACATCCACATGTGTGTAAATTAATGTGTTGATGAATTTAATTAAAGGTAAAGTGCAAATCTGATGGGTCAATTAGGATCTAAGAGATATATGGTGTAAATTGGttgtttgatgtttttatttgttatattcCTCATTAATGAGTCTGAATTATTGTGGCATAATTGCAGAAATAAAGTTTGTTTGTTGAGACCAAGAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813240.1 True 2330 mRNA 0.44 2 632750 806188
XM_039813248.1 False 2103 mRNA 0.44 2 803958 807043

Neighbor

gene id symbol gene type direction distance location
LOC120566616 NA coding upstream 6285 622451 ~ 626465 (+)
LOC120566389 NA coding upstream 13651 614215 ~ 619099 (+)
LOC120566458 NA coding upstream 76907 486626 ~ 555843 (+)
LOC120566597 NA coding upstream 123278 486627 ~ 509472 (+)
LOC120566531 NA coding upstream 138468 486612 ~ 494282 (+)
LOC120566870 NA coding downstream 33619 840662 ~ 858533 (+)
LOC120566581 NA coding downstream 166762 973805 ~ 984586 (+)
LOC120566725 NA coding downstream 259655 1066698 ~ 1072641 (+)
LOC120566475 NA coding downstream 285976 1093019 ~ 1103529 (+)
LOC120566383 NA coding downstream 331035 1138078 ~ 1171265 (+)
G221 NA non-coding upstream 109761 522532 ~ 522989 (+)
G55 NA non-coding upstream 222288 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 246102 370651 ~ 386648 (+)
G49 NA non-coding upstream 263453 369028 ~ 369297 (+)
G48 NA non-coding upstream 286843 345628 ~ 345907 (+)
G270 LOC103372508 non-coding downstream 1518 808561 ~ 811947 (+)
G195 NA non-coding downstream 78064 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 84578 891621 ~ 892123 (+)
G281 NA non-coding downstream 160287 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 495670 1302713 ~ 1303535 (+)
G176 LOC104946033 other upstream 34543 583390 ~ 598207 (+)
G184 NA other upstream 150860 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 311971 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 408154 200413 ~ 224596 (+)
LOC120560058 NA other upstream 450447 158391 ~ 182303 (+)
LOC120566368 NA other downstream 100797 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 119263 926306 ~ 1011615 (+)
G199 NA other downstream 209864 1016907 ~ 1019038 (+)
G292 NA other downstream 309581 1116624 ~ 1144413 (+)
G165 NA other downstream 337611 1144654 ~ 1158559 (+)

Expression


Co-expression Network