tomm20b (tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505)


Basic Information

Item Value
gene id tomm20b
gene name tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1451999 ~ 1458867 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813482.1
GTCCTTAAGGGTCCTTCCTGCCCTGAGCCGCTCCGCCAGTCTCCTGACGTAAACCGACCACCGGAgaaaaaacagtaaattaaCCCGAAATCCTCCTCGAACCGACCGGGTACCGGGAGTCATGATCGGCGGGAAGACCAGCGCGCTAGCCGCGGGGGTGTGCGGCGCCCTGCTCGTCGGTTACTGCATCTATTTCGACAAGAAACGACGCAGTGACCCCAACTTCAAGAACAGGCTGCGAGAACgGAGGAGAAAGCAGAAGGTGGCCAAAGAGAGGGCAGGCATGGcaaagCTCCCGGACCTGAAGGACGCCGAGGCGGTCCAGAAGTTCTTCCTGGAGGAGATCCAGCTCGGGGAGGAGCTGCTGGCTCAGGGCGACTACGAGAAAGGCGTGGACCACCTGACCAACGCCATCGCGGTGTGCGGTCAGCCTCAGCAGCTGCTGCAGGTGCTGCAGCAGACTCTGCCTCCGCCCGTCTTCCAGATGCTGCTCACCAAACTGCCCAGCATCagccagCGTATCGTGAGTGCACAGAGTCTGAGCGAGGACGATATAGAATGAGAGGATCGAGAGGAATcgactcctcttcctcctccttccctcgTGTCTCCATGACGACCTGCAAAAACGCCTCGGCCTCCATCGCTCCAGGCCGATGCGCATCACTTCCCACATCAAGGCACCCTAAAGAgaatttagtattttttattcctGGTTTATCCGACAAGTCGGTTTGAtagtttgtggtttttttttttttttttttttttacttaaatgaCCTGTTTTTGGGGTATCATAACAGCCAGAGACATACAAAGAGccccccccctcacacacacacacacacacacacaccccactccCTACGTCATTCGGTACTGGTTGATCACCACAACCAAACCAATCTGCAGAGATCCtaaatgaaaatctgcagaatttagcggactgtttttctgtttgggGCTGGAGATATGTTAACACTAGAGATgtcacaatgacattttttccTTCCCAATagcgattccgatacctgaacttgcgtatcgtcAGATACCGAGTACTGAGCCGATAccagtatgttaaaaaaatacataaacactcacctaaaggattattaggaacaccctactaataccatGTTTGACCCCCGTTCGctcttcagaactgccttaattcttcgtggcattgattcaacaaggtgctggaagcattctttagaaatgatgGCCCATactgagaggatagcatcttgcattTGATGGAGATTTGGGGGATGCAcgtccagggcacgaagctcccgttccaccacatcccagagatgttctattggggtgagatctggtgactgtgggggccattttagtacagggAACTCACTGTCATGTTCAAGAGACCAGTCTGAAATGAttggagctttgtgacatggtgcgttatcctgctggaagtagccatcagaggatgggtccatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaagctgtggcatttaaacg

Function

symbol description
tomm20 Enables protein-transporting ATPase activity and unfolded protein binding activity. Involved in protein targeting to mitochondrion. Located in mitochondria-associated endoplasmic reticulum membrane and mitochondrial outer membrane.

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM20 homolog

GO:

id name namespace
GO:0006605 protein targeting biological_process
GO:0005742 mitochondrial outer membrane translocase complex cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17770 TOM20; mitochondrial import receptor subunit TOM20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813482.1 True 1534 mRNA 0.51 5 1451999 1458867

Neighbor

gene id symbol gene type direction distance location
LOC120566769 NA coding downstream 874007 572764 ~ 577992 (-)
tbce NA coding downstream 1022015 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 1121966 319682 ~ 330033 (-)
LOC120560232 LOC103372506 coding downstream 1145369 277480 ~ 306630 (-)
LOC120560139 gtdc1 coding downstream 1181461 254800 ~ 270538 (-)
LOC120560873 LOC104946033 coding upstream 166663 1625530 ~ 1629159 (-)
LOC120566021 NA coding upstream 638502 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 669706 2128573 ~ 2135521 (-)
sde2 NA coding upstream 793185 2252052 ~ 2266353 (-)
LOC120566094 LOC103375177,LOC102205209,LOC101467885,LOC100705917 coding upstream 812593 2271460 ~ 2302586 (-)
G570 NA non-coding downstream 66405 1385333 ~ 1385594 (-)
LOC120566915 NA non-coding downstream 99016 1352254 ~ 1352983 (-)
G513 NA non-coding downstream 138521 1220503 ~ 1313478 (-)
G517 NA non-coding downstream 144554 889728 ~ 1307445 (-)
LOC120566896 NA non-coding downstream 169357 1245236 ~ 1282642 (-)
G581 NA non-coding upstream 29581 1488448 ~ 1562974 (-)
G588 NA non-coding upstream 51523 1510390 ~ 1521486 (-)
G590 NA non-coding upstream 57259 1516126 ~ 1516675 (-)
G591 NA non-coding upstream 77379 1536246 ~ 1536655 (-)
G583 NA non-coding upstream 89165 1548032 ~ 1575776 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 91526 1359664 ~ 1360473 (-)
G519 NA other downstream 477172 966236 ~ 974827 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other downstream 565656 885349 ~ 886343 (-)
G413 NA other downstream 1012551 438657 ~ 439448 (-)
LOC120574930 LOC103372508,LOC108249786,LOC103470876,LOC102234899 other downstream 1205026 233044 ~ 246973 (-)
stab2 NA other upstream 11550 1470417 ~ 1576495 (-)
LOC120566421 NA other upstream 274679 1733546 ~ 1749692 (-)
G670 LOC103370005,LOC106529077 other upstream 590202 2049069 ~ 2050384 (-)
G974 NA other upstream 1399629 2858496 ~ 2859302 (-)
G1003 tmem178a other upstream 1504873 2963740 ~ 2964320 (-)

Expression


Co-expression Network