LOC120566870


Basic Information

Item Value
gene id LOC120566870
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 840662 ~ 858533 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813541.1
CATCTGTCACTGTCTGCTGATGAAGGTACGACGTCTCTTTGACCTCATCTGAACGGAACTTTAACAGCGGAACAAGCTGACAGTAGGAAGCCACGATGACGGCAGTGGACCTTTTCAACACTTTGGAGGATTTAAAAGAAGAGGAATTTAAGAAATTCAAATGGTGTCTGCAGCAAGACATCCTGGAAGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAACGCAGAAAGGCAGGACACGGTGGATGTATTGGTGAATACCTATCAACTTCAAGGAGCTCTGAAGGTGACCAAGAAGGTTTTAGAAATGATCAAAAGGAATGATCTGGTGCAGAGTCTGCCAGACACCAGCTCAGGACCAGAAGATCACAAGATGCATGATGTTGTTCCTCTGAAAGAAGAATATGAAAGAAAGAAGGCCGAAGCTGGAATTCagcagatgatccagaagagacgaGTGAAGATTCAGGAGATAAAACGCTCGGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagaaaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagctcTCATGCTCTGAAGACCACCTCTATCTTCTCCAGAGTGTGCAGTCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCATCCGTCCATCATATGAGGGGACTGTGGTGAGAGCTGTGGTtcagctggaggagacactcagtaaagagatgaagaagctgcttgaAGCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactTTTGATCCTGATACAGCACATCCTGCTCTCAAATTGTCTGATGATGGGAAACAAGTGAATCTTGGTGATCTACTATCTATACTACTTAGGAAGAATCTCCCAGACAACCCAGAGAGATTTTCTAAGTGCGCTAGTGTTTTAGGAAATCAGAGTTTCTCTTCAGGCAGATTTTATTTTGAGGTTCAAGTTAAAGGAAAGACTGATTGGGATTTAGGAGTGGCCAGAGAGTCAATCAACAGGAAGGGAGGCATCACACTGAACCCTCAGAATGGTTACTGGACAATATGGTTGAGAAATGGAAATGAGTACAGAGCTCTAGCTGGCTCTCatatccttctctctctgaagtgtcggcctcagaaggtgggggtgtttgtggattatgagaagggtctggtgtccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactccTCCCATACTTCGGTCCCTGTTTTAATGATGCCGGTAAAAACTCTGCccctctgatcatctctcctgtcagCAGTGGCGGTCTTAACATAGAGGCATAGTTAGGCAGCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813541.1 True 1502 mRNA 0.46 3 840662 858533

Neighbor

gene id symbol gene type direction distance location
LOC120566667 NA coding upstream 33619 632750 ~ 807043 (+)
LOC120566718 NA coding upstream 48757 788102 ~ 791905 (+)
LOC120566682 NA coding upstream 66937 756425 ~ 773725 (+)
LOC120566650 NA coding upstream 122991 712986 ~ 717671 (+)
LOC120566437 NA coding upstream 144547 691340 ~ 696115 (+)
LOC120566581 NA coding downstream 115272 973805 ~ 984586 (+)
LOC120566725 NA coding downstream 208165 1066698 ~ 1072641 (+)
LOC120566475 NA coding downstream 234486 1093019 ~ 1103529 (+)
LOC120566383 NA coding downstream 279545 1138078 ~ 1171265 (+)
LOC120566742 NA coding downstream 290473 1149006 ~ 1150498 (+)
G270 LOC103372508 non-coding upstream 28715 808561 ~ 811947 (+)
G261 NA non-coding upstream 148433 686445 ~ 692229 (+)
G221 NA non-coding upstream 317673 522532 ~ 522989 (+)
G55 NA non-coding upstream 430200 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 454014 370651 ~ 386648 (+)
G195 NA non-coding downstream 26574 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 33088 891621 ~ 892123 (+)
G281 NA non-coding downstream 108797 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 444180 1302713 ~ 1303535 (+)
G309 NA non-coding downstream 492987 1351520 ~ 1352050 (+)
LOC120566394 NA other upstream 86900 708153 ~ 753762 (+)
G176 LOC104946033 other upstream 242455 583390 ~ 598207 (+)
G184 NA other upstream 358772 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 519883 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 616066 200413 ~ 224596 (+)
LOC120566368 NA other downstream 49307 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 67773 926306 ~ 1011615 (+)
G199 NA other downstream 158374 1016907 ~ 1019038 (+)
G292 NA other downstream 258091 1116624 ~ 1144413 (+)
G165 NA other downstream 286121 1144654 ~ 1158559 (+)

Expression


Co-expression Network