LOC120566976



Basic Information


Item Value
gene id LOC120566976
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 21542336 ~ 21544719 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039813731.1
GTCAAACATGTTGAGGTTTGTCTTCAAACAGTAAGCTGAGATGGACTATGAAAACCTGCTTTATGCTAGGAagaaaaaacTGTACAGACTGGTTGCTGTGAGCTTCGGAATCCTGTGTATCCTGCAAGCTGCTGTGAATATTTCACTGCGTCTTGCTCTCTATTCAGATTTCGAAGCCATTATTAAAAATCTGACTGAAGAGGGAGAAAATTGGAAGAGGAAGCTGAGTACCTTCAATCATTACTCCCAACATGgatgggtttatttcaaccacagTTTCTATTACATTTCTTCTATTGGCAAGTCCTGGCAAGAAGGTAGAGATGACTGTCAGCAAAGAGGCACAGACCTGATAATTATTAACAACAAAGAAGAACAGGACTTTGCAAGACAATTCAAACGGCGCACATGGATTGGGCtgactgacagagagacagaagggaTATGGACATGGGTGGATGGGACTGCACTAAACACAAGCTTCTGGCACACTGGAGAGCCCAACAGCTATCAAAGCCAAGAGGAAGACTGTGGAGAAATAAGGATGTACGATGTAGAAAACAGCTGGAATGATATGCCATGTAAAATgaaaaactattggatctgtgAAAAGGTGGTGGCTCTGTAACTCAGCatccaaacccaccagactggTAATAGATAAGTTGCAGGGTTAGTGGCTCATCACCTTGaatacagaaacacatacaaGCCTTtctagtttttcttttttttacattctgtcTATACATTCAATCTGTTTAATCGTTAGATTTTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039813731.1 True 779 mRNA 0.41 6 21542336 21544719

Neighbor


gene id symbol gene type direction distance location
LOC120556977 cep95 coding downstream 1965 21509457 ~ 21540371 (-)
LOC120557018 cep95 coding downstream 26521 21512132 ~ 21515815 (-)
LOC120556990 NA coding downstream 56279 21483919 ~ 21486057 (-)
trnar-ccg_1 NA coding downstream 157493 21384771 ~ 21384843 (-)
LOC120564440 LOC103368239,LOC104952986 coding downstream 159395 21377110 ~ 21382941 (-)
LOC120566968 LOC106610423,LOC105006713,LOC108260735,LOC106610424 coding upstream 9706 21554425 ~ 21556165 (-)
LOC120566963 NA coding upstream 13241 21557960 ~ 21561643 (-)
ten1 ten1 coding upstream 101078 21645797 ~ 21648906 (-)
aanat1 aanat,LOC102776855 coding upstream 158662 21703381 ~ 21706851 (-)
LOC120567942 sphk1 coding upstream 210573 21755292 ~ 21792116 (-)
G6501 NA non-coding downstream 79686 21458904 ~ 21462650 (-)
G6483 bptf non-coding downstream 180215 21358598 ~ 21362121 (-)
G6471 NA non-coding downstream 221654 21320018 ~ 21320682 (-)
G6410 NA non-coding downstream 406445 21133510 ~ 21135891 (-)
G6387 psmd12 non-coding downstream 559059 20980185 ~ 20983277 (-)
G6565 NA non-coding upstream 105889 21650608 ~ 21657734 (-)
G6571 NA non-coding upstream 119776 21664495 ~ 21667705 (-)
G6595 NA non-coding upstream 181670 21726389 ~ 21727737 (-)
G6602 NA non-coding upstream 198137 21742856 ~ 21743110 (-)
G6616 NA non-coding upstream 207125 21751844 ~ 21753144 (-)
LOC120574674 NA other downstream 1348998 20187281 ~ 20193338 (-)
spink4 NA other downstream 1497610 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 1745814 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 1776949 19764893 ~ 19765387 (-)
G6084 NA other downstream 1996409 19489588 ~ 19545927 (-)
LOC120566957 NA other upstream 18372 21563091 ~ 21569059 (-)
G6592 ube2o,LOC106534564 other upstream 163821 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 783800 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 1120656 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 1437206 22981925 ~ 22988500 (-)

Expression



Co-expression Network