LOC120567461 (LOC104963199,LOC100697187,LOC102310533,LOC101478713,LOC102778966)


Basic Information

Item Value
gene id LOC120567461
gene name LOC104963199,LOC100697187,LOC102310533,LOC101478713,LOC102778966
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16795409 ~ 16809326 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814437.1
TAGACCTACACCCTactcgGACAGATGCAGATGCTCCAGCTGACAGCAGCCCTGGTCTactctttttcatttttggatATGTTTGGACAACCAAGGTAAAGTCATCAGCTGTCTGCTGGGGATCAGCATTGGGCTCCATTTGAACCTTAAACCCACGGAAGCCTCAAAGTGACCGCGGACTGTGCATGGATGTGAGCGCGCGCTGATGAGCGGGAGCAGGACGTTTGGATAGAGAGACACGAGCTTTTTGCATGCGACCAGTTTGCAGCACCGCTACACACACAAGCTGATGCTTGCAGAAAAGTGACATGCAAACAGGAATGAAGTCGTAGATGAGCTGCGGCTCCGACGCgcgcacagatcctgcaggtccAGCGCGGTGGTCTGGTAAGAACtgaaagaaaatatgaaatccAGGAGTCAGGACCAGAGTTTGTCTGACTCCAGAGAGCTGGACAGATCGTACGACCCACTTACAGGTAATCCACCATCCAAACCCAATAAAAAGACCTTAAAGCAGCGGTTCCTCAAACTTCTCCCCTGCTGTCGCTCTAGCTCCAGCTCTTCAATTTCTCAAAGTAATATAACTGATGATGATGAGCTGACGACGGTACGTTACCGACCGCAGAGGCTCGACCATCTCGTACATCAGACCAACTTCAGCAAGAAAGAGCTGCAGGTCCTCTACCGGGGATTCAAAAATgAGTGTCCCAGTGGTGCTGTGGATGAACAGACTTTTAAAAGCATCTATTCCAAGTTCTTCCCTCAAGGAGATTCAAGTATGTATGCACATTTCCTGTTTGAAGCTTTTGACATCCACAACAATGGATCGGTCAGCTTTGAGGACTTTGTCATTAGTCTGTCCATCATCTTAAAAGGTTCCATTACTGATAAACTCAACTGGGCCTTTAATCTGTACGATCTTAACAAAGACGGCTGCATCACCAGAGAGGAGATGACAAACATCATGGACTCCATTTATGATATGATGGGAAAGTATACCGATCCCTGCATGAGGGATAATGCTCCCAAAGAGCACGTTGACAACTTCTTCCagAAAATGGACAAGAACAATGACGGAGTGGTCACCATCGAGGAGTTCTTGGATACATGCCAAAAGGATGAAAGCATCATGCAGTCCATGCACATGTTTGACAATGTGATCTAAAGTGGACATAGACATAACATTTCCCCTGCTGCCTGGAGTTCTTCTACAGTCATTCTGCCCCAGCCAGAGTGGAACGGGGCTTCTGGGCCCTAAACAGAGTGGGGCAGGGTGCAAAGGGCAATGTCCTGAAGATAGCTAACCCCAAACCACCTTTTCttgtgaaatgttttattttattaaacgtGTACAGGAAGGCATCAAAA

Function

NR:

description
PREDICTED: Kv channel-interacting protein 2-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K06268 PPP3R, CNB; serine/threonine-protein phosphatase 2B regulatory subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814437.1 True 1371 mRNA 0.47 10 16795409 16809326

Neighbor

gene id symbol gene type direction distance location
hap1 LOC100707478,LOC101477593,LOC102309093,LOC102207703 coding downstream 44006 16726000 ~ 16751403 (-)
LOC120569500 NA coding downstream 78300 16710764 ~ 16717109 (-)
LOC120561596 LOC103384341,LOC104922281 coding downstream 90024 16702962 ~ 16705385 (-)
LOC120561619 LOC104921626 coding downstream 100032 16691687 ~ 16695377 (-)
krt94 LOC104921625,LOC107090776,LOC103384339 coding downstream 128103 16663839 ~ 16667306 (-)
armh3 lg6h10orf76,cunh10orf76 coding upstream 6507 16815833 ~ 16839722 (-)
ldb1b ldb1,LOC104963201,LOC108444470,LOC104922276,LOC103353370,LOC103150493,LOC100706951,LOC108270891,LOC101479469,LOC107090769,LOC106518772 coding upstream 34461 16843787 ~ 16873490 (-)
cant1b LOC104922273,LOC104950180 coding upstream 86379 16895705 ~ 16904668 (-)
afmid afmid,LOC102792082 coding upstream 97770 16907096 ~ 16924598 (-)
syngr2b syngr2,LOC107090770 coding upstream 127475 16936801 ~ 16945862 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 143883 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 442941 16350067 ~ 16352468 (-)
G5081 NA non-coding downstream 445426 16348266 ~ 16349983 (-)
G5069 NA non-coding downstream 469563 16325521 ~ 16325846 (-)
G5068 NA non-coding downstream 470086 16325015 ~ 16325323 (-)
LOC120568012 NA non-coding upstream 107748 16917074 ~ 16920726 (-)
G5202 NA non-coding upstream 158583 16967909 ~ 16972243 (-)
G5242 NA non-coding upstream 242302 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 250835 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 252584 17061910 ~ 17062119 (-)
LOC120558720 NA other downstream 447487 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1109770 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 1891180 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2076307 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2752899 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 602727 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 901313 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 1008181 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 1026578 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 1070542 17879868 ~ 17881759 (-)

Expression


Co-expression Network