pla2g12a (pla2g12a)


Basic Information

Item Value
gene id pla2g12a
gene name pla2g12a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 30418495 ~ 30424022 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815243.1
AGCGTCAAACCCGGAAACGACATCACCACAGCTGCGACAGTTATGTCAATGGCGACAGGTAGTGACATGAAAACAACCAGAAGTTTAACTTGAGATGCCATCAAGACAACATTTTGGGGAATTAATCACCCTTAATTAAACTAATTATCCGGGAAACGCTGGTTTCGCTCTCCGACGTTAAGTGGACGATGCACTACCACagctgtgtttttctgttggGTTTGTATTCTTTTGGATGTCTCcaatgtgtgtctgcatgcaaACAAGAGCCGAAGACTCCAGACTGGAGGATGACTCTGAAAACTATCCGTAACGGAATACATAAGATTGACACGTACCTGAATGTAGCACTGGACTTGTTTGGTGGCGATGACGGGCTGTGCCATTATAAGTGTAGTGATGGTTACAAGCCGGTACAACGTCCTGGATACAAGCACCCACCACCCAACGGATGTGGCTCGCCGCTGTTTGGATTTCAGtttGACATAGGCATCCCGTCCATGACCAAATGTTGTAACCAGCATGACCGCTGCTATGACACCTGCGGCCGTGAGAAGCACGAGTGCGATGATCAGTTCCAGGACTGTCTCGAGACCATCTGTAGGAATGTGCAAAGGACTCTGGGATTGGCCCAGAGTGTCCAAGCTTGTGAGTCAGCAGTCACTCTGCTGTTTGACGCCGTTATGCACTTGGGATGTAAGCCATACCTGGACAGCCAGAGGCagtcttgtgtgtgtcagtatgaaGTGAAGAGGGAACTGTGACACCGCCACAGGAGCAAGGCTGTAGACTGATTCAGAAGCACAACACCGACAGAAGGATGCCAGCAATAAACTTTTCTCTCCGACTTGTagattttctcaaagacagagctgCACTGACTTGTGTCCATCACCTCCCTTTATTGGAGTTTTGAAAtgtagacatacagtatattagacAAAGTGAATGTGAAAATACCTAGTGGACAGTTAATATCTTTCCTATGcagttaattttttatattttgttaatactgtgtgatgtgtttgtcCTGTGATGGACTGGAAAACAGGGTGTTCAGGGTTTCCCAGGCTGTTGGATGCTTGGGTAGCACTTTATTTTATGGGTTTGTAAATTCCTAATAATTCCCTAAGAAGTTTCGTGGTAATGATTATGGGTAAAACAAAGACAATGTAAATGGAGCTGTTCTCTCTGGAAACCAGCCACAGCTTTTAAACTCAGCACAACAAACTAAACTGACTaagatcttttttattttttttatttttcctgtaATTACAACCACATTTATATAGTTCTTTCCAGGAAACCTTCAATAAATTATTAGGAAAAAATGGAccgtaaaataaaacattacctCCCATAACCCTATTAGGAACATGTGATGAATAAGTAAGACAATGGCTGTTTCTACAGCATATTAAACAATTGTggttttaccttttttaaatttgtaaagtaattgtaaaatatcacATGACAGGGAATGCAACTTTTGCACTCCACTGATGCCAACGTAATGACACGGTGGAGAAAACCTGTGTTAAACtgtcataaaaataaagaaacatgcTTTTATTGATCA

Function

symbol description
pla2g12a Predicted to enable phospholipase A2 activity. Predicted to act upstream of or within arachidonic acid secretion; lipid catabolic process; and phospholipid metabolic process. Predicted to be located in extracellular region. Orthologous to human PLA2G12A (phospholipase A2 group XIIA).

NR:

description
LOW QUALITY PROTEIN: group XIIA secretory phospholipase A2

GO:

id name namespace
GO:0006644 phospholipid metabolic process biological_process
GO:0016042 lipid catabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004623 phospholipase A2 activity molecular_function

KEGG:

id description
K01047 PLA2G, SPLA2; secretory phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815243.1 True 1588 mRNA 0.42 4 30418495 30424022

Neighbor

gene id symbol gene type direction distance location
LOC120560609 casp6 coding downstream 10803 30401440 ~ 30407692 (-)
lef1 lef1 coding downstream 97532 30278527 ~ 30320963 (-)
papss1 papss1 coding downstream 166867 30206501 ~ 30251628 (-)
dkk2 dkk2 coding downstream 252300 30152144 ~ 30166195 (-)
tbck tbck coding downstream 317367 30043939 ~ 30101128 (-)
dnajb14 dnajb14 coding upstream 584 30424606 ~ 30439055 (-)
LOC120569182 ttc39b,LOC103361331,LOC103383857 coding upstream 16360 30440382 ~ 30447099 (-)
psip1a psip1 coding upstream 30328 30454350 ~ 30464962 (-)
spag5 NA coding upstream 508727 30932749 ~ 30950945 (-)
trmo NA coding upstream 531600 30955622 ~ 30960798 (-)
G8843 NA non-coding downstream 63843 30354438 ~ 30354652 (-)
G8834 hadh,LOC103384097 non-coding downstream 145145 30271464 ~ 30273350 (-)
G8790 NA non-coding downstream 410512 30006394 ~ 30007983 (-)
G8707 NA non-coding downstream 798011 29620019 ~ 29620484 (-)
G8704 NA non-coding downstream 803095 29615125 ~ 29615400 (-)
G8880 NA non-coding upstream 26309 30450331 ~ 30450686 (-)
G8890 NA non-coding upstream 275115 30699137 ~ 30699343 (-)
G8952 NA non-coding upstream 385349 30809371 ~ 30899158 (-)
G9081 NA non-coding upstream 689594 31113616 ~ 31120342 (-)
G9104 NA non-coding upstream 831064 31255086 ~ 31255294 (-)
G8701 NA other downstream 824872 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 1078648 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 3123584 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3839680 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3882759 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 151850 30575872 ~ 30744878 (-)
G8975 NA other upstream 547366 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 1510615 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 1797935 32221957 ~ 32226423 (-)
lrba NA other upstream 2160702 32584724 ~ 32781154 (-)

Expression


Co-expression Network