LOC120568176


Basic Information

Item Value
gene id LOC120568176
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7390099 ~ 7437258 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815515.1
ACCTGCGATTCAGCAGGTGATCAGCTCAGTGTAGCTTTCCAGGCCTTGGGAAAACACAACCGAGCCGAAATGGCCGACACCGCTGGTTTGATCCGGACTGGACTCCTCGTTttctctatttgtgtgtgtgtcgttacCGGAAGTCCTATAGGTACTTCAACCATAAATTGTGTACAAGGTAGCAATCTAATCGTGGGTGCAGTTGATGAAGGATATGAAGGAGACGTGGAGGTGGTGAGCGGGATCACGGCAGGAAGCGGTGTGAAGCTGGTGTCATACATCTTCCCAGAACACCTGGAGTATCTGACGCTGAGCTTCACACCCGGAGACACCAGCGCCACAGTTCGCACCACGAAGCCACTGGACGCAGACACACTGGCAACCAGTGGCAGCACCTTGTATTACTCGGTCATGTGTGACGACGTCTTTAAGCACAACAACACTCGCAAACTGAACATCAACGATCTCAATGACAACAGCCCGATATTTGAACAGAAGTCCTACAGCATTTCTGTCTCTGAGACACAAGCGGTGGAGAGCGAGGTTCTTCGAGTGAAAGCTACAGACGGTGACAGCACCCCAGCAAACAACGTAGTGACATATTccatgGCACCAACATCAGAGGACTTTACTGTGACCAACTctggggcttttattttgaagagaCGTCTGAACTACAATTTAGTGCAAAAGTACAACTTCCTTGTGACGGCCAAGGATAACCATGGATTAAATGACACAGCCACTGTCTCTATCAACGTACTCGACTTTGATAACCTAAATCCGTATTTCAGCCACAATGTGTACCAGTCCTTTATTCCAGAGAATCAGGATGGGCCTTTCCGGACCATTGAGCCAGAGGCGATAAAGGCTCAGGATGGAGACACCGGGATCGACACGACTGTAACTTACAGCATCAGTGCAgtGTCTCCAGACAAGTATCGGGGAAACTTCGACATTGACCCGAGCAGTGGAGTTGTGACTGTGCTGACTGCTTTAGACAGAGAGGAGATGAGCAGCAGCGTGATCTCTGTCAGCATCAAGGCGGCCCAGACTGACGACAGTTTGAAGACGGCGGATGCTGTGGTGTCCGTCACTGTCGAGGACGTGAATGATAATCCTCCAGAGTTTGACCAGCCCGACTACTCTGTAACGCTTCTGGAAAATTCTCCTGTTGATGCTGTTCTGTTCAAAGCCGTCATCACTGACCTGGACCAGGGAGGATTTGTGGGAGAGTTGCAGATCCTTCCAGAATCTTCTCCTTTCTCTATCGGCGCCGATgggatggtcagagtgaagaaCTCCACAGTTCTGGACAGAGAGACGACTGAAAGATTTACATTTCAGATCAAAGCAACTGAGACGGATCCACCCAAAAATTTTGCAGAGGTGCAAGTCAGTGTAACTCTTCTGGATGAGAATGACAACACCCCCGTGTTCACCAGTGCGAAGTACGAGGGAAAAGTGTTTGCAAATCAAACAGTGGGAATGTCTCTGGTCCAGGTTAAGGCAGAAGATCCAGATGCTGATAAGAACGGGCAGATCAAATACTCTATTGAGTTTGGCAACAATGACGGATACTTCTCAATCGAAGAAAACAGTGGAGACATCACGCTGGCTAAAATCATTCCCCTGGTGGAGAACAAGATATTGGCATTCCCTCTCTACATAACAGCCAGAGATGGGGGAACCATATCCCGAGTCTCCTCAGCACTTGTTACCATTAGTGCTCCTAGTGACTCTAAACCTCAGTTTTTACAAAAAGTTTACCGTGGCACCGTGGAAGAAGAGCAGGAAACAGGAGTTGTCATTCTTAGGGTGGCCTTCATGGCGATAGCTACTGAGATTCCTGTGACTCTCCAAGTTGATACAGAAGTCGACAAGTTTGCCATCTCCTCCAGTGGTGAATTCACCACTAAAGTGAAGCTGGACTACGATGAGGCTCCACACAACTACTCTGTGGCGATCTCCATCTCTGACGGAGTCAACAGTGACAGTGCGGTTGTGGAGGTTCAAGTCACCGACGTCAATGACAACAGTCCTGTTTTTACCTCTGATTCTGTCCCAAAATCAGTCCCAGAGGACGCAGAGGTAGGATCCAATGTGACTGTTGTTCCCGCTACAGACAAAGACAGCAGCTTCAACAAGGAGATCAGATACTCtctgagaggaggagaggggaagtTCTCTGTCGATCCTGTGTCTGGGATGGTGAGTGTGACTGGAGCACTTGATAGGGAGACTAAGGCAGAGTACAGCCTGCTGATGGTGGCTGAAGATCAGGGTCGTCCAGCCAGGTCGGCCACAGCCTCCCTGCTGATCCGAGTGTCGGACATCAACGATAACGTCCCCAAGTTCTCAAATGCTGAGTATCAGGGTGAAGTATTGGAGACGGCGCCAATTGGTACAAGCTTGCTCACATTATCAGCTGTAGACCTCGATGAAGCAGCAAATGGGAGCGTTACTTACAGTATTTTGAGCCAGAGTCCCTCATCAGAAGCTCCTGTTTTTGAGTTGGACTCTTCCAGCGGGACCCTGCAGCTGGCCCAGCCTCTGGACTACAGCAAGGTGAAGGTGTACAGCCTCGTGGTTCAGGCCTCCGATGGAGGGACTCCCTCTCTGGTTGGGAATGGCTCTGTGGTGGTGAAGGTGAAGGACGTGAACAACAACCCGCCTGTATTCAGTAAGGAGAGCTACGACGTGGCCGTCTCTGAGAACCTGGCCAGCGGCGCGTCCATCCTGACCCTGGAGGTCACTGACCGGGACGAGGGTGGATTCTCCCGTGGTTACTTCCTTTATACCAACGATACCTTTGACATCAACAAACTAGGAGTGGTCTCACTGAGGAAGGACGTCACCttggacagagagacaaaggacAGATACATGTTCCAGgtggtGGCGGTGGATCAGCCCATTGACGGTCTGCGAGCCACAGCTCAGCTCAGCATCACCGTCCTGGACTACAACGACAACGCCCCACAGTTCCCGATGATCCCGGACCCGCTACAGATCCCTGAGGGCGTGTACTCGGAGGACAGTCCAGGAGAAGTTTTCACCATCGTGCCCACAGACGCAGACCTCGGGCCCAACGGAGAGGtcaccctctccctcctctccccccaGCCTCTCTTCAGATTCACAGAGGATGGGAAGTTGCTGGCTGTCGGCAAACTGGATCGGGAGAGCAGGGAAACGTATGAGCTGCTTGTGAAGGCCTCGGATAAAGGCAGCCCCCCGAGAGAGAACATCACCAGCATCAGAGTGAGCCTCATCGACGTCAACGACAACAGACCTGAGTTCGGCTCCAGCAGCTACGTCAGCAGCATCCTTCTGAAGGACGCCGCGGAGGGGAAGCTGCTGCTGACGCTGTCCGCCAGCGACCGAGACGCCGGGAACAACTCGCTCATCACCTACAGTTTCTCTGCAGGAAGTTCTCCATATTTGGCCTTAAACAGCGAGAGCGGAGACGTGACGTTGACCTCTGGCCTCGCTGATGTCACAGAGGACACCACCGTGGTGCTGACGGCCATGGCCAAAGACCACGGCCAGCCTCCTCTCAACTCCACAGttcGGGTCGTGGTGAATCTGCGGGTGGTCAGCCTGGTGGAGGGCGTGGCCTTCCAGAGCTCCTCCTACAACTTCAGCGTCCCCGAGAACCAGCCGGAGGGGGCGGCGGTGGGGGCCGTCTGGGCCTCCGCAGGAAGTGACATTTACAACGTCACCTACACACTAACTACACACACCGACCTGTTCTCCGTCGACGCCAGCGGAGCCGTCCGGACCAGAGCACAGCTGGACAAAGAAGAGCAGGAGTGGTACATCCTGGACGTGGAGGCTGTGGACACGAGGATCCCCCCTACGTCAGCCACCGCAATGgtCAGAGTCCAGGTGGAGGACGTCAGCGAGTCGCCACAGTTTCCCTCTCAGCTTTATAAAGCATCTGTGTTCAGCATCGCCCCGTACAAAACCTCCGTCATCCACGTCaagGCTTCAGACCCTGACGTGGGCGAGGGGGGTCAGCTGGTCTACAGCCTGTCGGCCGACAGCGGTTACTTTGACGTGGAGCCGTCCTCCGGTCTGCTGTACGTGGTGTCGGCGCTGGCTCTGGCTGATCAGACGGCTGCGGTGGAGGTGAAGGCCACGGACCCCCGAGGGCTTCAGGCTACGACCAGGGTGGAGGTGGAAGTGCACGGAAGCGCGAGCAGCGGCGACGTGGCGGTCATCTCCCTCAACCAGCCTGCTAACGTGGTGGAGAAGAAAGTCCCGGAGCTGGAGAAGTCTTTGGGTGCAGCTCTGGGCTGGACTGTGATCATCATGGAGGTGTCGAGCGCTAACGGAGGATCGCCAGAGTCCAGGACTCGGAGAGCCGCCGTGAAGACTCTGGTCAGCTTCATCAGTCTGGACGGACAAGACGTCGTTTCTGCTGAAGAAGTCACAAAGAAACTGCAGAGCCAATCAGCTGCTGTGAGGGCGGAGCTGGTCAAAGTGTTCGGGGAGAGTCTTCATTTTGACGTGGAGGCGAAGCCTCAGAGCCCCGCCTCCAACCAGGCGGCTGTCATCGCTCTGGCAACCATGTTGGCCCTGAGCATGCTGGGATTGATCGTCGCGGTCGCCTTGATCATCAGGTTCAAGAGGACGCAGAAACACCAGGAGGATTCTGACAAGGAGAGTTTGGACATCGTCCGTAAAGCTGAAGGTTACACGAACTGGTCAGAGGAGAGTCCTGAAACATCTGAACAgcgacacacaaagacacatgagaGGAGAACGCAGGACGAGCAGCAGAGGACAGACGACGGTGGGACAGTAACGACGGACGGTAACAGTGTGAGATTCAAACGGGACGGACAGATGGAGGACGGTAGTGAAAGCCGCACTTCTCTCTGATCTGAACGCAGCAGCCTTCAGTCCGCCTGTATGGAGTCTGCAGAGTGCCACTAAAATAATTAGACTATACTGATTATACTCAGTCCGCCTGTATGGAGTCTGCAGGGTGCCACTAAAATAATTAGACTATACTGATTATACTCAGTCCACCTGTATGGAGTCTGCAGGGTGCCACTAAAATAATTAGACTATACTGATTATACTCAGTCCACCTGTATGGAGTCTGCAGGGTGCCACTAAAATAATTAGACTATACTGATTATACTCAGTCCACCTGTATGGAGTCTGCAGAGTGCCACTAAAATAATTAGACTATACTAACTGATAATGCTCAGTTAATATGTTTAAGGTGAGACATGTTTTCAATCACAAAATGGGAAAACGTAAATGTTAGCAGGAAACAAATAAAGAAACTGAAGTGGGTTTTGATAGACCGAGAcggacacaaaataaaaatgtgaaatgttaaaaataattgtgattccattttgaaatatttttttttttttatattattaagaAAAGTTCGTTCTTGACCTTTTTGAAAAGCAAACTTCAGCCACTGACGAAGACCGGGAGATGCTGTTAAAAGCTCTGGAAAAAAatagtaaacacacacacacatata

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815515.1 True 5518 mRNA 0.52 30 7390099 7437258

Neighbor

gene id symbol gene type direction distance location
LOC120565053 NA coding upstream 150506 7238071 ~ 7239593 (+)
trnae-uuc_49 NA coding upstream 176543 7213485 ~ 7213556 (+)
trnae-uuc_48 NA coding upstream 177065 7212963 ~ 7213034 (+)
trnae-uuc_47 NA coding upstream 178094 7211934 ~ 7212005 (+)
trnae-uuc_46 NA coding upstream 180657 7209371 ~ 7209442 (+)
pus10 pus10 coding downstream 175665 7612923 ~ 7640109 (+)
LOC120570741 NA coding downstream 256327 7693585 ~ 7703831 (+)
LOC120563246 NA coding downstream 281698 7718956 ~ 7743994 (+)
LOC120563293 NA coding downstream 320428 7757686 ~ 7765391 (+)
LOC120563312 NA coding downstream 340604 7777862 ~ 7784253 (+)
G2428 NA non-coding upstream 4746 7385132 ~ 7385353 (+)
G2386 NA non-coding upstream 146627 7241821 ~ 7243472 (+)
G2374 NA non-coding upstream 241615 7147274 ~ 7148484 (+)
G2361 NA non-coding upstream 303840 7085736 ~ 7086259 (+)
G2355 NA non-coding upstream 334292 7055267 ~ 7055807 (+)
G2486 NA non-coding downstream 116782 7554040 ~ 7557441 (+)
G2505 fam161a,LOC102790424 non-coding downstream 151385 7588643 ~ 7591076 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding downstream 164775 7602033 ~ 7603591 (+)
G2523 NA non-coding downstream 221146 7658404 ~ 7659023 (+)
G2524 NA non-coding downstream 222142 7659400 ~ 7660095 (+)
G1973 NA other upstream 855729 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 952882 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 987459 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1473725 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1918690 5387393 ~ 5471409 (+)
G2530 NA other downstream 262007 7699265 ~ 7699540 (+)
G2557 NA other downstream 504289 7941547 ~ 7948253 (+)
G2590 NA other downstream 652555 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 964457 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1180125 8617383 ~ 8643702 (+)

Expression


Co-expression Network