LOC120568346


Basic Information

Item Value
gene id LOC120568346
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4006070 ~ 4013823 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815776.1
tgttttcttctgtaATTACTGGAGTTATCTGACTGTGCCTCCTGTTCTAGTCTGACTCAGTCAGTCTGCTCTCCAGCTCTGTGGAGATGGTGGGGGTAAAGgtctccatctagtggactgaTAGCACAACTACAGCTCATCTGTGGGTTCTCTGCCTTACACATGTTGGAACCATGGTTACAGCTGCTCAACCATCTCTAACTGTCCATGACTTTCTCCATGTCATTGCACTCAGATCAGTCCAgcactgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtgttgtgttgaagcccagagcagcagcagagaccagactctcctgaacctgaaccagctgtgtgtccatcaAGAGCCACCAGTCCATGGATCCACCTTAAGTGTTTAAAGGACAGCTTCCTGCAGAGACTCACAGGAAACCACGATGACGGCAGTGGACCTTTTCAACACTCTGGAGGATTTAAGAGAAGATGAATTTAAGCAATTCAAATGGTTTCTGCAGCAGCAGGACATCCTGGAAGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAATGCAGAAAGACAGGACACAGTGGATGTGATGGTTAAAACCTTTCAACTTCATGGAGCTCTAAAGGTGACCAAGAAGGTTTTAGAGAAGATCAACAGGAATGATCTGGTCCAGAGTCTGCCAGACACCAGCTCAGGACCAGAAGAGTCAGTGAATGTCAATGATGCTGGAAAGGCTTCAGAGAACAGAGGAACTCCCTCCTCTCAGAGCAAAGACGGGATTGTTCCAGTACCAAAGCCACCACGACACATCTCATATTATCAACAAAAGCTTCGGCCAAACCTCCAAAATGAGTTTTTGTGTGCACAAGAGGGTTGGGCACAGAACAAAGATGGGCGACCTCTGGATGATATCTACACAGATCTGTACATCAAAGCTACTGGTGATgtacacatcaacacacagcaTGAGGTCAGGCAGATTGAGACAGTGAAGCCAACAGATACAGAGACAACAATTACACCTTGTGACATGTTCAAACACCCTTCTGTAAAAAAGAGACCCATAAGAACAGTACTGACCAATGGAATCGCAGGAATTGGAAAAACATTTCTTGTGCACAAGTTTGTGTTGGACTGGGCGGAAGGAAGAGCCAATCAAGATGTGCATCTCGTTTTCCCCTTCACCTTCCGCCAGCTGAATTTAAAGAAGGGGGAAAAGTGGTGTTTGGCAGAGCTCATTCATGAATGTATCTGGGAGACCAGAGACATCAAGGAAGAAGCTCTTAATCACATTTTTACAGCTCTGCAGTCATCAGGAAACACCAACTATGACAGGAGCGAATTCAaacttctgtttgttttggatgGACTGGATGAGAGCCGCCTTGATCTGGACTGCTCCACCAATTAAAACCAGACAGTTAAAATTGATGTGACAGCGCCGACCTCAGTGGACgagctgctgacaaacctcatcaagAAGAAACTTCTTCCCTCTGCTCGcatctggataaccacacgacctgcagcagccaatcagatccatTCTGATTTTGTAGACATCATGACggaggtcagagggttcactgacccacagaaggaggagtactttaGAAAGAGATTCACAGAT
>XM_039815785.1
tgttttcttctgtaATTACTGGAGTTATCTGACTGTGCCTCCTGTTCTAGTCTGACTCAGTCAGTCTGCTCTCCAGCTCTGTGGAGATGGTGGGGGTAAAGgtctccatctagtggactgaTAGCACAACTACAGCTCATCTGTGGGTTCTCTGCCTTACACATGTTGGAACCATGGTTACAGCTGCTCAACCATCTCTAACTGTCCATGACTTTCTCCATGTCATTGCACTCAGATCAGTCCAgcactgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtgttgtgttgaagcccagagcagcagcagagaccagactctcctgaacctgaaccagctgtgtgtccatcaAGAGCCACCAGTCCATGGATCCACCTTAAGTGTTTAAAGGACAGCTTCCTGCAGAGACTCAGAAACCACGATGACGGCAGTGGACCTTTTCAACACTCTGGAGGATTTAAGAGAAGATGAATTTAAGCAATTCAAATGGTTTCTGCAGCAGCAGGACATCCTGGAAGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAATGCAGAAAGACAGGACACAGTGGATGTGATGGTTAAAACCTTTCAACTTCATGGAGCTCTAAAGGTGACCAAGAAGGTTTTAGAGAAGATCAACAGGAATGATCTGGTCCAGAGTCTGCCAGACACCAGCTCAGGACCAGAAGAGTCAGTGAATGTCAATGATGCTGGAAAGGCTTCAGAGAACAGAGGAACTCCCTCCTCTCAGAGCAAAGACGGGATTGTTCCAGTACCAAAGCCACCACGACACATCTCATATTATCAACAAAAGCTTCGGCCAAACCTCCAAAATGAGTTTTTGTGTGCACAAGAGGGTTGGGCACAGAACAAAGATGGGCGACCTCTGGATGATATCTACACAGATCTGTACATCAAAGCTACTGGTGATgtacacatcaacacacagcaTGAGGTCAGGCAGATTGAGACAGTGAAGCCAACAGATACAGAGACAACAATTACACCTTGTGACATGTTCAAACACCCTTCTGTAAAAAAGAGACCCATAAGAACAGTACTGACCAATGGAATCGCAGGAATTGGAAAAACATTTCTTGTGCACAAGTTTGTGTTGGACTGGGCGGAAGGAAGAGCCAATCAAGATGTGCATCTCGTTTTCCCCTTCACCTTCCGCCAGCTGAATTTAAAGAAGGGGGAAAAGTGGTGTTTGGCAGAGCTCATTCATGAATGTATCTGGGAGACCAGAGACATCAAGGAAGAAGCTCTTAATCACATTTTTACAGCTCTGCAGTCATCAGGAAACACCAACTATGACAGGAGCGAATTCAaacttctgtttgttttggatgGACTGGATGAGAGCCGCCTTGATCTGGACTGCTCCACCAATTAAAACCAGACAGTTAAAATTGATGTGACAGCGCCGACCTCAGTGGACgagctgctgacaaacctcatcaagAAGAAACTTCTTCCCTCTGCTCGcatctggataaccacacgacctgcagcagccaatcagatccatTCTGATTTTGTAGACATCATGACggaggtcagagggttcactgacccacagaaggaggagtactttaGAAAGAGATTCACAGAT
>XM_039815794.1
tgttttcttctgtaATTACTGGAGTTATCTGACTGTGCCTCCTGTTCTAGTCTGACTCAGTCAGTCTGCTCTCCAGCTCTGTGGAGATGGTGGGGGTAAAGgtctccatctagtggactgaTAGCACAACTACAGCTCATCTGTGGGTTCTCTGCCTTACACATGTTGGAACCATGGTTACAGCTGCTCAACCATCTCTAACTGTCCATGACTTTCTCCATGTCATTGCACTCAGATCAGTCCAgcactgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtgttgtgttgaagcccagagcagcagcagagaccagactctcctgaacctgaaccagctgtgtgtccatcaAGAGCCACCAGTCCATGGATCCACCTTAAGTGTTTAAAGGACAGCTTCCTGCAGAGACTCACAGGAAACCACGATGACGGCAGTGGACCTTTTCAACACTCTGGAGGATTTAAGAGAAGATGAATTTAAGCAATTCAAATGGTTTCTGCAGCAGCAGGACATCCTGGAAGGCTACCAAAGCATCAAAGTGTCCAAGTTGGAGAATGCAGAAAGACAGGACACAGTGGATGTGATGGTTAAAACCTTTCAACTTCATGGAGCTCTAAAGGTGACCAAGAAGGTTTTAGAGAAGATCAACAGGAATGATCTGGTCCAGAGTCTGCCAGACACCAGCTCAGGACCAGAAGACGGGATTGTTCCAGTACCAAAGCCACCACGACACATCTCATATTATCAACAAAAGCTTCGGCCAAACCTCCAAAATGAGTTTTTGTGTGCACAAGAGGGTTGGGCACAGAACAAAGATGGGCGACCTCTGGATGATATCTACACAGATCTGTACATCAAAGCTACTGGTGATgtacacatcaacacacagcaTGAGGTCAGGCAGATTGAGACAGTGAAGCCAACAGATACAGAGACAACAATTACACCTTGTGACATGTTCAAACACCCTTCTGTAAAAAAGAGACCCATAAGAACAGTACTGACCAATGGAATCGCAGGAATTGGAAAAACATTTCTTGTGCACAAGTTTGTGTTGGACTGGGCGGAAGGAAGAGCCAATCAAGATGTGCATCTCGTTTTCCCCTTCACCTTCCGCCAGCTGAATTTAAAGAAGGGGGAAAAGTGGTGTTTGGCAGAGCTCATTCATGAATGTATCTGGGAGACCAGAGACATCAAGGAAGAAGCTCTTAATCACATTTTTACAGCTCTGCAGTCATCAGGAAACACCAACTATGACAGGAGCGAATTCAaacttctgtttgttttggatgGACTGGATGAGAGCCGCCTTGATCTGGACTGCTCCACCAATTAAAACCAGACAGTTAAAATTGATGTGACAGCGCCGACCTCAGTGGACgagctgctgacaaacctcatcaagAAGAAACTTCTTCCCTCTGCTCGcatctggataaccacacgacctgcagcagccaatcagatccatTCTGATTTTGTAGACATCATGACggaggtcagagggttcactgacccacagaaggaggagtactttaGAAAGAGATTCACAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815776.1 True 1635 mRNA 0.46 4 4006070 4013823
XM_039815785.1 False 1632 mRNA 0.46 4 4006070 4013823
XM_039815794.1 False 1566 mRNA 0.46 3 4006070 4013823

Neighbor

gene id symbol gene type direction distance location
LOC120568358 LOC103148993,LOC108243373 coding downstream 1278 4002437 ~ 4004792 (-)
LOC120568380 NA coding downstream 60654 3913798 ~ 3945416 (-)
LOC120568258 NA coding downstream 104323 3879887 ~ 3901747 (-)
slc8a1a LOC100709284,LOC101487495,LOC102200447 coding downstream 152273 3821980 ~ 3853797 (-)
srd5a2a NA coding downstream 323200 3666913 ~ 3682870 (-)
LOC120562966 NA coding upstream 25346 4039169 ~ 4077987 (-)
LOC120568355 LOC103356192,LOC104948400,LOC105918398 coding upstream 220060 4233883 ~ 4240654 (-)
LOC120568341 LOC108251661,LOC106676713 coding upstream 326378 4340201 ~ 4344817 (-)
ttbk1a ttbk1 coding upstream 336371 4350194 ~ 4408366 (-)
LOC120568276 LOC103369331,LOC103383363,LOC101482017,LOC102297858 coding upstream 442459 4456282 ~ 4495278 (-)
LOC120568400 NA non-coding downstream 31600 3972021 ~ 3974470 (-)
LOC120568412 NA non-coding downstream 42191 3954828 ~ 3963879 (-)
LOC120568407 NA non-coding downstream 129492 3873544 ~ 3876578 (-)
G1318 NA non-coding downstream 136292 3869463 ~ 3869778 (-)
G1312 NA non-coding downstream 189216 3816015 ~ 3816854 (-)
G1436 NA non-coding upstream 225420 4239243 ~ 4321225 (-)
G1440 NA non-coding upstream 233839 4247662 ~ 4251483 (-)
G1459 NA non-coding upstream 319266 4333089 ~ 4333324 (-)
G1477 NA non-coding upstream 406345 4420168 ~ 4450896 (-)
G1478 NA non-coding upstream 406646 4420469 ~ 4424244 (-)
G1242 NA other downstream 333532 3648688 ~ 3672538 (-)
dpy30 NA other downstream 341681 3659840 ~ 3664389 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other downstream 357597 3494887 ~ 3648473 (-)
G1240 NA other downstream 357840 3581218 ~ 3648230 (-)
LOC120551303 NA other downstream 595775 3408821 ~ 3410295 (-)
G1464 NA other upstream 331724 4345547 ~ 4346086 (-)
G1623 NA other upstream 627763 4641586 ~ 4788577 (-)
LOC120563598 NA other upstream 760994 4774817 ~ 4783916 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other upstream 1062783 5076606 ~ 5085518 (-)
G1726 NA other upstream 1083546 5097369 ~ 5097634 (-)

Expression


Co-expression Network