cdkn2d (cdkn2d,LOC102798019)


Basic Information

Item Value
gene id cdkn2d
gene name cdkn2d,LOC102798019
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24214693 ~ 24217245 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816054.1
ACACCCGCCTTTTTTTCCACACTTGCCTCTGGAGAAATACAACCAAAGGCCAGAAATGTGAATGAACTGCCTTTGAAGACATCAACGTATACGAATCGCCCGCTTTCTTCGCTACGTGTTTTGATTGGTCGACGGTTGCTGTTACCACAGTGATAGTGTAGTAACCAGAGTTGTAACCCCGCCTATTTTATCATATTTGGAAGCGCAACGCCCTGTAGGCGAGCTGTGATTGGCCAGCGTGTGTTCTCTCCAATGTTTTGTAAATTGTACTCTGGAGGAGACACCGCTGTGTTGATCTCAGCGCGCAAATGTATTTTCTAATGTTGATAAACTTTCCTTGTTtggattttatttaaaaattactGGTCTTTAGAAACAGCGGGATTGAACCTCATTGCGACGTTGTGGATTTTAAGGAACCGAACAAGGCAGAAAGAGAGACTATGGTCCTTAGTCAGATGGATGCCGGTAAAGCTTTGACGGCGGCAGCAGCCCAAGGGAATACGAGCGAGGTGCAGAGGATCCTGGATGAATGCAGATTGCATCCTGATACTCTCAATGAATTTGGCAGGACTGCGCTACAGGTGATGATGATGGGGAACTCCAAGATCGCCAGTTTGCTACTGGAAAAAGGAGCAGACCCCAACGTCCAGGACAAACATGGAATAGCACCTGTCCACGATGCAGCCCGAACAGGATTCTTGGACACTCTTCAGGTTCTGGTGGAGTACGGTGCTTCGGTAAACATCCCGGACCAGAGCGGCGCCCTGCCTATCCACATTGCCATCCGGGAGGGCCACCTGGATGTTGTGGAGTTTCTGGCACCGCGGTCTGACCTGAAGCACGCTAACATCAGCGGTCAGACAGCAATAGATGTGGCCCGAGCTTCATGTATGCCTGCTATGATTGACTTGCTTTTCGCTCACATTCATAGTTAGTCTGAAGTCTGGGTGCCTTCTGGGTAACCCTAACTTTTTTGCTTCAAACCTGGTGACTTGAATTCATTGCTGTGTaaaggattattttttttgttaatggTCGCTCAGCATTAATATGTGACACAGGACATATTGTCCTGGCAGCTTGTTTTCAGTGGATGGGTGGCTATATACAGTAGACACCTCTTTTGCACAGTGCAATTTAGGCACCTTATATATCTGTTTCCCTTATTAAATGGGAGTGCACATTTGTAGATAGTTTCCCAGTGTTGTAATTATTGCATTATTTCCATTGTGTAACAGTTGAAAccttgtatgtgtttttaaacacttttacaaaacTTGACATGGTGCACCCTAAATGCTTTTCATAGTTGTGTTTCTCTTAATTATATGTACTTAGAATTGGAATTTGATGACTTTACTCTTATTTATTGTTGGAATAGGACTGCATATTCCTGTGACTTTGTAAATAGCAACATTAATTGTGATTTGTTGAAATGTTATTtataaaatacttttaaaacaaaagTGAGATTATTCACTTTACTATTTGaagaataaaacacaaaataaagtgTTGAACTTGGA
>XM_039816060.1
ACACCCGCCTTTTTTTCCACACTTGCCTCTGGAGAAATACAACCAAAGGCCAGAAATGTGAATGAACTGCCTTTGAAGACATCAACGTATACGAATCGCCCGCTTTCTTCGCTACGTGTTTTGATTGGTCGACGGTTGCTGTTACCACAGTGATAGTGTAGTAACCAGAGTTGTAACCCCGCCTATTTTATCATATTTGGAAGCGCAACGCCCTGTAGGCGAGCTGTGATTGGCCAGCGTGTGTTCTCTCCAATGTTTTGTAAATTGTACTCTGGAGGAGACACCGCTGTGTTGATCTCAGCGCGCAAATGTATTTTCTAATGTTGATAAACTTTCCTTGTTtggattttatttaaaaattactGGTCTTTAGAAACAGCGGGATTGAACCTCATTGCGACGTTGTGGATTTTAAGGAACCGAACAAGAAAGAGAGACTATGGTCCTTAGTCAGATGGATGCCGGTAAAGCTTTGACGGCGGCAGCAGCCCAAGGGAATACGAGCGAGGTGCAGAGGATCCTGGATGAATGCAGATTGCATCCTGATACTCTCAATGAATTTGGCAGGACTGCGCTACAGGTGATGATGATGGGGAACTCCAAGATCGCCAGTTTGCTACTGGAAAAAGGAGCAGACCCCAACGTCCAGGACAAACATGGAATAGCACCTGTCCACGATGCAGCCCGAACAGGATTCTTGGACACTCTTCAGGTTCTGGTGGAGTACGGTGCTTCGGTAAACATCCCGGACCAGAGCGGCGCCCTGCCTATCCACATTGCCATCCGGGAGGGCCACCTGGATGTTGTGGAGTTTCTGGCACCGCGGTCTGACCTGAAGCACGCTAACATCAGCGGTCAGACAGCAATAGATGTGGCCCGAGCTTCATGTATGCCTGCTATGATTGACTTGCTTTTCGCTCACATTCATAGTTAGTCTGAAGTCTGGGTGCCTTCTGGGTAACCCTAACTTTTTTGCTTCAAACCTGGTGACTTGAATTCATTGCTGTGTaaaggattattttttttgttaatggTCGCTCAGCATTAATATGTGACACAGGACATATTGTCCTGGCAGCTTGTTTTCAGTGGATGGGTGGCTATATACAGTAGACACCTCTTTTGCACAGTGCAATTTAGGCACCTTATATATCTGTTTCCCTTATTAAATGGGAGTGCACATTTGTAGATAGTTTCCCAGTGTTGTAATTATTGCATTATTTCCATTGTGTAACAGTTGAAAccttgtatgtgtttttaaacacttttacaaaacTTGACATGGTGCACCCTAAATGCTTTTCATAGTTGTGTTTCTCTTAATTATATGTACTTAGAATTGGAATTTGATGACTTTACTCTTATTTATTGTTGGAATAGGACTGCATATTCCTGTGACTTTGTAAATAGCAACATTAATTGTGATTTGTTGAAATGTTATTtataaaatacttttaaaacaaaagTGAGATTATTCACTTTACTATTTGaagaataaaacacaaaataaagtgTTGAACTTGGA

Function

symbol description
cdkn2d Orthologous to human CDKN2D (cyclin dependent kinase inhibitor 2D).

NR:

description
PREDICTED: cyclin-dependent kinase 4 inhibitor D

GO: NA

KEGG:

id description
K06623 CDKN2D, P19, INK4D; cyclin-dependent kinase inhibitor 2D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816054.1 True 1529 mRNA 0.43 3 24214693 24217245
XM_039816060.1 False 1525 mRNA 0.42 3 24214693 24217245

Neighbor

gene id symbol gene type direction distance location
fdx2 fdx1l,LOC104950501 coding downstream 64868 24145402 ~ 24149825 (-)
zglp1 zglp1 coding downstream 69486 24137388 ~ 24145207 (-)
LOC120569492 NA coding downstream 79024 24133897 ~ 24135669 (-)
lyl1 LOC105910150 coding downstream 118470 24091667 ~ 24096223 (-)
LOC120556266 LOC103353763,LOC100700287 coding downstream 145865 24066928 ~ 24068828 (-)
ap1m2 ap1m2 coding upstream 123 24217368 ~ 24223061 (-)
ldlrb LOC106675973,LOC102204666 coding upstream 10175 24227420 ~ 24241325 (-)
LOC120561874 LOC103353879,LOC104964059,LOC101071906 coding upstream 28428 24245673 ~ 24274926 (-)
atg4da atg4d coding upstream 58671 24275916 ~ 24285789 (-)
LOC120561855 NA coding upstream 69217 24286462 ~ 24361503 (-)
LOC120567450 NA non-coding downstream 115600 24096692 ~ 24099093 (-)
G7179 NA non-coding downstream 130417 24082513 ~ 24084276 (-)
LOC120556287 NA non-coding downstream 154849 24056501 ~ 24059844 (-)
G7141 NA non-coding downstream 158933 24015459 ~ 24055760 (-)
LOC120556236 NA non-coding downstream 271120 23937409 ~ 23943573 (-)
G7292 NA non-coding upstream 227935 24445180 ~ 24449314 (-)
G7324 NA non-coding upstream 319135 24536380 ~ 24539504 (-)
G7325 NA non-coding upstream 322719 24539964 ~ 24541406 (-)
G7343 NA non-coding upstream 340233 24557478 ~ 24557697 (-)
G7348 NA non-coding upstream 368781 24586026 ~ 24586319 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 328931 23882745 ~ 23885762 (-)
palm3 NA other downstream 403672 23772856 ~ 23811021 (-)
G7071 NA other downstream 445852 23752026 ~ 23768841 (-)
si:ch211-207j7.2 NA other downstream 468662 23734364 ~ 23746031 (-)
LOC120557242 NA other downstream 493943 23711827 ~ 23720750 (-)
G7323 NA other upstream 314991 24532236 ~ 24535316 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other upstream 448140 24665385 ~ 24669297 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other upstream 538687 24755932 ~ 24759618 (-)
G7589 NA other upstream 1481016 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 1566699 25783944 ~ 25788229 (-)

Expression


Co-expression Network