cep20 (fopnl)


Basic Information

Item Value
gene id cep20
gene name fopnl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 36088196 ~ 36091347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816627.1
TTCCGTCACTAGATGGTAGAAGTCTCTGGTAGTATTGAACTGTGGCAGACAGACAGTCGTTTGTTTACATTTGTTGCAATGGCGACCATCACTGAACTGAAGTGTGCCGTAAGGGAAACCCTGGAGTCCCGCGGTGTGATGGGCCAGCTGAAGGCTCGTATCCGGGCAGAGGTATTCAGCGCCCTGGATGACCAACGTGAACCTCGTCCGCCGCTGTCCCACGAAAACCTGCTGATCAACGAGCTCATCCGGGAGTACCTGGAGTTCAACAAGTACAGATACACTGCGTCAGTCCTGACAGCAGaGTCAAGCCAACCTGAAGTTCCCTTGGACAGACAGTTCCTGGCAAATGAGCTGAAAGTCACAGAGGATACAAGCTCCAAGTCTGTACCTCTTCTCTATGGCTTGGTGTGCCACTTTGTGAACAGCGGTGATAGTGGTGGAAAGGTGTTTCTGCGGGGGGCCTCTCTGCCAGCTGGTACAACTGCCAGCAACACAGTACCTGGACCTGATGCCTAAAAGTCGATGCACTCAAGTAATGGTACAGGATGGACTGAAAAGATGCCTTTACACACTTTTTGGGGAGATTTAAGTGACCTTATAATCTTCCATAGTTTTTACGGTGTTTTCAACTAAATGTTCACAGGCATTACAGCATGGACTATATGAATTCTACTGATACAAATGCACAAGTCATTTCTATTGCTTTATTCTGTAAGTTGCCAATGATACCAGATGGCCTTTTTTGTTTAGGTTGAAATATCTGACTTTACCAAATGGGTTTAGTATCAGTCGGTTGGTACTGCTTGCATTAATCCATATTGCTCGTTCTCTCATTAATTCAGGCAAAATAACATTCCTTGATGTCTGCTCtattttaatttacaaatgtTTGATACTTTTATATTGTCTTTTagttgttgaaaaataaatgttttatatttatgtattcaaTTTGTTGAATCAAAAATGTGTGTGGCAATGCTCTTTTATTGGCTACCACATGGTGGCAGCCTCACCAAAGAAACGGCTGAAGACTGCTATTGACAGAGGGTTGAGGAGTGACACGTTGTTGGTTGTGACTTGGTGACGACACTATGTGTTCATCTCTAGCATGTGGCATTGTGTGTATAAACAGGGTACTCTAATACCGTGGTTAAAATGATCTTGCTACTTACATTATGTCTGTTCAACTGTATAAATATATGAGGAGTTAACTTTAATTTTACTTGAAAGTGTATTGTTTGTAATCAGAACTGTATTTGCAAGTACAGTTGGTACTTTTGAACATTTGCTTCATGCAATGCAGATGATCACAGTACAGTTTAAATAGTGCTGAATAACCTGCACCTGAAAGGTTGCCACAGTCACATTCAGTTACTTTCCTGTGATTGTCTTAACATTTTGGCACCCATTGTGTTGGTTTGTGCAGCCAAGCCCACACATGTTGCCCCTGCCCCAATGCTACTTGACCCCTGTTTGTCTGTAATAGTTAGATACCTCTTGATTAATAATATGTTTTATCTTGGTCTCACATAGCTGATAATCCACGTTTTATGCTAAATGAAATGGGGCATGTGCCAGATATTTTTATATCTCCTGCTTGTTCACCCCTTTTGCTGTGTTGTCTGCAGCTTATGAACCCGGGCTGTGAAGTCGTTATGACCTCCATAACAGCAATGTTGGCAACACTAAAATGATATTAACTGTTCCAAAAAGGAAA

Function

symbol description
fopnl lisH domain-containing protein FOPNL

NR:

description
PREDICTED: lisH domain-containing protein FOPNL

GO:

id name namespace
GO:0034453 microtubule anchoring biological_process
GO:0005815 microtubule organizing center cellular_component

KEGG:

id description
K16535 FOPNL, FOR20; lisH domain-containing protein FOPNL

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816627.1 True 1723 mRNA 0.42 4 36088196 36091347

Neighbor

gene id symbol gene type direction distance location
myh11a myh11 coding downstream 3678 36054914 ~ 36084518 (-)
LOC120566152 kiaa0430 coding downstream 46793 36022178 ~ 36041403 (-)
LOC120566690 ddx17,LOC105012177 coding downstream 95108 35984246 ~ 35993088 (-)
klf1 LOC106569090,LOC105898955,LOC107700996,LOC107559026 coding downstream 239735 35844287 ~ 35848461 (-)
LOC120563277 NA coding downstream 256897 35828755 ~ 35831299 (-)
abcc6a LOC103355936,LOC100691027,LOC101464353 coding upstream 586 36091933 ~ 36117858 (-)
ern2 NA coding upstream 83341 36174688 ~ 36188769 (-)
LOC120561124 chst12 coding upstream 99493 36190840 ~ 36203136 (-)
eif3ba eif3b coding upstream 116656 36208003 ~ 36217410 (-)
LOC120569591 NA coding upstream 119781 36211128 ~ 36211215 (-)
G10202 NA non-coding downstream 156341 35931599 ~ 35931855 (-)
G10200 NA non-coding downstream 158936 35928749 ~ 35929260 (-)
G10198 NA non-coding downstream 167120 35920855 ~ 35921076 (-)
G10174 NA non-coding downstream 245059 35799621 ~ 35843137 (-)
G10143 NA non-coding downstream 385604 35698632 ~ 35702592 (-)
G10349 NA non-coding upstream 70669 36162016 ~ 36166879 (-)
LOC120548049 NA non-coding upstream 190219 36281566 ~ 36284261 (-)
LOC120569597 NA non-coding upstream 190660 36282007 ~ 36282095 (-)
LOC120569600 NA non-coding upstream 190958 36282305 ~ 36282393 (-)
LOC120569596 NA non-coding upstream 191280 36282627 ~ 36282716 (-)
micall1a LOC100693188 other downstream 118930 35944048 ~ 35969266 (-)
LOC120572869 NA other downstream 501583 35584470 ~ 35586613 (-)
rgs12b rgs12,LOC104946104 other downstream 636985 35404815 ~ 35451211 (-)
G9997 NA other downstream 687722 35398640 ~ 35400474 (-)
G9740 NA other downstream 1630561 34452850 ~ 34457635 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 141860 36233207 ~ 36256880 (-)
LOC120547992 NA other upstream 185507 36276854 ~ 36280814 (-)
LOC120561459 LOC103359169,LOC107395760 other upstream 238434 36329781 ~ 36337148 (-)
LOC120560464 kcnq5,LOC100711684,LOC102297355 other upstream 432924 36524271 ~ 36718918 (-)
rims1b LOC102800191,LOC102207824,LOC101482845,LOC102293251,LOC100711956,LOC103371245 other upstream 639751 36731098 ~ 36839548 (-)

Expression


Co-expression Network