tppp2 (LOC103374906,LOC101485391,LOC102784423)


Basic Information

Item Value
gene id tppp2
gene name LOC103374906,LOC101485391,LOC102784423
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 20822497 ~ 20827923 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817026.1
CGTCATTGTGAGAAAGTCTGGGAGTggcaggaaggaggagaggcagaggagaaagaagaagaagaaaaaggaggaggaagacgaaAACGAAGAGGTCAAGCAGCTGTACGCGAATCAGGATTTTCCTGAATATTACACAGCATCTTTCCATTTACGGCAGCAGTATGGCTGAGGGCTCAGTGTCTATAGCAGAGGTAGAGACCTCCTTCCAGAAGTTTGCAGTCCATGGAGACACTAAGGCCAAAGGGAAGGAGATGAACGGCAAGAACTTTGCTAAGCTTTGCAAGGACTGCAACATCATCGATGGCAAGAACGTCACCACTACAGATGTTGACATAGTTTTCAGCAAAGTAAAGGCAAAGTCAGCTCGTGTCATCACATTTGAGCAGTTCAACCAGGCCCTGACAGAGTTGGCTCCCAAACGTtttaaaggcaaaaacaaagaGGAATCGCTTCAGCAGCTCTATGGTCTCATTGTTGGTAAGGAGCCTACCAATGTCGGAGTCACTAAAGTGGCAAAGGCAGCAGCAGTGGACCGATTGACTGATACCACCAAGTACACTGGAGCGCACAAGGAGCGGTTTGACGAGTCAGgcaaaggaaaaggaaaggtTGGGCGCGAAGAAATCCCAGACAGCAGCGGCTATGTGGGAGCTTACAAGGGCAGTGGCACTTatgatgaaaaagtgaaagaaacaTAAACATAATTCTGCTGATTATGAAACTGAAATTTCATTCAATGACTTGAATTAggggtgataaaaaaaaaaatcaacataaatTCATTGgctactgtatacagtatgtcttgTGGGCCTAGCATTAATAACATTTGTTGGATCCATGaaaaatcaatgaaaaaaaaaggatgattcatttaaagaaactatttccttaaaataatcaaaagatAATGACAATACTTAGCTGCAGTTAGTTACAGAAATGCAGACATGTTTAATGGGCCGTAGTATGAACAACTGCTATTGTTCtgtatattttttaacaattttacaGAAAAGATTAAACTGTAGTTGAAACCAAGCATGCTTTATAGAAACTAACTCTCCTTTGTACTATAGCTTAATACTGTGCCTTAGTATAATGTAGCTGGTAGTGTGAATGCTCTCTACAGTAATGTGTTGCTTTTATCACGTACCTTGATGCAATGGATGATACTTTAGCTGGTTTTCAAGAAAGGTTACTGCGTCAGTTCTCATCCCTTGCTAAGCGTATCACTTTATGGTTCAGTGCCTTTTGCTATATGACCAATCAGTGGCCATTACATGGCATTTATTCCTatcattaaataaaaatgatattAACAAGAGAAAAATATCACATGCAGTGAAGAACACAGAATAATACTGTACTGAAGAAGCTACAATACAGAATACATCCTCTTTATTCCTCATTTTTACCTACTGACAACATCATGCTGCCATTTTTAATGCTCATAatgcatatttttttctttatttagttGAAAGGTTGAATCAATTCAGAATGTTGCTTTTCTCCCAGAATGATGGTCtaaaacatgcattttaataAAAGAAGTGAATGTAAAAACCTAAATCAATATCCAAAAATTCACCAACATGTTGCAGCATTTTGCATGCTGCAGTGTAGCATCAAAACTCCTCTCAAAACCCAATTTTAGACTCTGATGTCAGCTTTAAAAGACAGTGCTGTGTGGTATCTAAGcaattgtaaaatgtaatcaATATGTTATGTTATTGTACACACTTGTCTGTTGCAGCCATGCTTACTTATAAATctgtagacatttttttttaaactcaccaAACTCTTTGTGGAGCTCATACTGTATAATAGGCTACATGAAAAACGCAAACAAAAAAAGGAGTGAATTTACCAtatcagaaaataaaacattttctcaagCATGTGTTGTCATTAAATAACTGTTAAAATCAATGAAGATTAACTCTCACCTAAGACCTGCTAATTTCCAGAAATAGCTGGGATGCAATTTCAGAACATAAAGGGCCCTTGTAAAACTATAAACACTTAACATACACTTATCTTTCTACCTGAACCCTCCTTGTAATGTGACACTGATGGCAATTATATAGAGGATTCATAAGAACAATTTTTAACAATGTGCATTGTGTTGTGCACATGTTAAAAGATACCGCCTCCATATCTCACACTATATAAGCCTGAGCTGATATGCATCACATGGGTTTTGTGTGGATAGTGCCATTGAATTCCATAATAGCCTGCATATATTCTCTGCATTACTGGATTCATGATTCACTATGATCACTGATCACTATAATCACTCCCAAAACACATTGAAGAAGTAATCCAATAAAGGAATGCCATATAGAATAA

Function

NR:

description
PREDICTED: tubulin polymerization-promoting protein family member 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817026.1 True 2361 mRNA 0.37 4 20822497 20827923

Neighbor

gene id symbol gene type direction distance location
LOC120565775 sgcz coding downstream 200699 20213717 ~ 20621798 (-)
LOC120556991 NA coding downstream 622619 20198021 ~ 20199878 (-)
LOC120564208 NA coding downstream 636102 20182899 ~ 20186395 (-)
LOC120556938 LOC104960150 coding downstream 695892 20114806 ~ 20126605 (-)
LOC120565191 LOC103366463,LOC102211221,LOC102302105,LOC101484083 coding downstream 733858 20044965 ~ 20088639 (-)
LOC120571719 NA coding upstream 14158 20842081 ~ 20845093 (-)
LOC120557145 NA coding upstream 18801 20846724 ~ 20847666 (-)
LOC120557739 pitpnc1 coding upstream 43897 20871820 ~ 20968107 (-)
LOC120552602 cacng1,LOC106534954 coding upstream 231525 21059448 ~ 21073939 (-)
LOC120565978 NA coding upstream 249949 21077872 ~ 21078676 (-)
G6297 NA non-coding downstream 77144 20745148 ~ 20745353 (-)
G6269 NA non-coding downstream 618802 20196278 ~ 20203695 (-)
G6264 NA non-coding downstream 640203 20182039 ~ 20182294 (-)
G6242 NA non-coding downstream 902217 19917116 ~ 19920280 (-)
G6233 NA non-coding downstream 980782 19839154 ~ 19841715 (-)
G6387 psmd12 non-coding upstream 152262 20980185 ~ 20983277 (-)
G6410 NA non-coding upstream 305587 21133510 ~ 21135891 (-)
G6471 NA non-coding upstream 492095 21320018 ~ 21320682 (-)
G6483 bptf non-coding upstream 530675 21358598 ~ 21362121 (-)
G6501 NA non-coding upstream 630981 21458904 ~ 21462650 (-)
LOC120574674 NA other downstream 629159 20187281 ~ 20193338 (-)
spink4 NA other downstream 777771 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 1025975 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 1057110 19764893 ~ 19765387 (-)
G6084 NA other downstream 1276570 19489588 ~ 19545927 (-)
LOC120566957 NA other upstream 735168 21563091 ~ 21569059 (-)
G6592 ube2o,LOC106534564 other upstream 880617 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 1500596 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 1837452 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 2154002 22981925 ~ 22988500 (-)

Expression


Co-expression Network