LOC120569156 (LOC102312368,LOC100706304,LOC102797228,LOC101468181)


Basic Information

Item Value
gene id LOC120569156
gene name LOC102312368,LOC100706304,LOC102797228,LOC101468181
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 29962630 ~ 29974420 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817034.1
TACTCCTACTGACAGGAACCTCCCACAAAGGTGTGTGTATAAAAAGAGCAATCACTGGTGACTACTTTTATCAAAAGAACAGTTCATCAAAGGAACATTTTGGTCTCATTAACAGGATTCTGCTGCTTTCCAGAGTCAAAATGGTGAATTACGAAGTGACTGTATCCACTGGCAATTTTGCCTTTGCCTCCACGTTTAACAACGTCTTCATTAAGCTGGTAGGAACAGATGGGGAGAGCAAACGCAAGTGGCTCATGGGGTTCAAAGGAGCTTCATCCTTCACCATTGGAGCAGTGTCTAGTTTTACCGTGTCCTGCCCTGGCTCCATTGGAAAGCTGGTCCTGATAGAGCTGGACAAACAGTGTCTCCCACTGTTCCCTGAAGACTCCTGGTTCCCCATCAAGGTGGAAGTGAAATCTCCTGAAGGAGATACCTACAACTTTCCCATCTACCGCTGGATCACTGACAGCAAGGTGTACCGCTTCCGAGAAGGAACAGCTCTGACAGTCTTCGAAGACAACCATCATCTTGGCAGGCACAGTCGGCAGAAGGAACTGGATCAACGAGAGAAGGACTATCGCTGGCATGTGTATGTAGAGGGAATACCCCACTGCATGAAGGCAGAGAACCCTCTTTCTTTGCCTTGTGAAGTCCGCTTCTCCTTTACTAAGACCACAGAGTTTCTCTACACTGCATCCACCGGGCTGACTGAACTGCAACTTAAGGGTCTGGCTAATTGCAAGGAGAAGTGGACAGATATTGATGCTATCAATCGGGTGTTCTGCTGCAAACGGACTGACATATCAGATTATGTCCAGGAACATTGGAAGGAGGACGCTTTTTTTGGCTACCAGTATCTAAATGGTGTCAACCCCATCTTGATCCGACGTTGTTCAGCTCTGCCTGATAACTTTCCTGTCACTGACGACATGGTCTTCCTCCGTGGACAGTGTAACTTGACAAATGAAATGAAGAAAGGCAACATATTCCTGTGTGACTACAAGCGTTTGGATGGAGTGAAAGCAAACACCATCAATGGGAAGAAGCAGTACTTGATGGCTCCACTCGTCCTGCTCCACAAAACACCTGATGATAAACTGATGCCAATTGCTATCCAGCTGAAGCAGACTCCATCAGATGACAACCCCATCTTCTTTCCTACTGATTCTGAGTACGACTGGTTGATGGCCAAGATTTTTGTGAGAAGTGCAGATTTCAATGAGCATCAACTCAATGTTCATCTGCTGCGCACTCATCTGCTGGCTGAAGTGTTTGCAGTGTCACTGCTGCGTAATGTGCCAATGGTGCATCCACTGTACAAGCTCCTCATACCTCACACTCGCTACACTCTGCAGATCAACCACTTAGCTCGACTTGTTTTAATATCTGAGACTGGAGTTTTTACAAAGTTTGCAGCTTCTGGTGGAGAGGGTATGATGACAATCCTGAAGAGATCACTGTCCTCAATGACCTACAGCTCCCTCTGCATACCAGATGACATTGCTGAGCGTGGTGTGGAGGCTGTGCCGAACTTCTACTACATGGATGATGGACTCAAGCTTTGGGATATCATCCAAAGGTTTGTGCAGGGAGTGCTCAGCTTCTACTACAAGAACGACGCTGAGGTCCAGAAAGACTCCGAACTGCAGAAGTGGATTTCAGACATTTTTGAACATGGATTTCTTTCCCAAGCATTCACAGGAATTCCACAGAGCTTTACCACCGTGGCTGAGTTGGTCAAGTTCGTCACCATGGTGATCTTCACTTGCTCAGGACAGCACTCAGCTGTGAATTCTGGACAGTATGACTATGGTGGCTGGATGCCCAACACTCCCATCTCTCTGCAACTTCCTCCACCAACCACAAAGGGAGAAACAAGCGAGGCCACGATGCTGCAGACATTCCCTGACGTCAACACAACAGTTCAGGGAATGTCCACCATGTGGCTACTCAGCAAGCAGTCGTCTGACTTCGTCCCTTTTGGCCAATACCCAGAGGACCATTTCAGTGAGAAGATTCCCAGCAAGCTGATAAAGGATTTTCAAGGGGAGCTTGAAGTGTTAAGTGCGGTCATCAACATCAGAAACAAGAAGCTGGAGGTCCCATACACATACATGGATCCAAAAAAGTTAGAAAACAGCGTGGCCATTTAAATATCAGAAGGTGTGACCTCCTCAGCTGTTGGCCAAATTCAGCTTCACATTAACAAAAGTGAGAAAGGGAAGAACTGCATGTTTCTGTTTTGAACTGATACTATAGTGGAAAGAAATGACTGCATGTGATTTTTGTATGCTgatatgtgtttatgtatacAGTCTGATTGATTAAACTGTGGTGATAAAATGCTGTTTTAAATCATACACATCCTAAATCTTCTTAGTTTATCAATGACTACACAGGGCAtcttattaaaataaattacaaatgaaaaataaaaaatgtgaaatttg

Function

NR:

description
PREDICTED: hydroperoxide isomerase ALOXE3-like

GO: NA

KEGG:

id description
K08021 ALOX12B; arachidonate 12-lipoxygenase (R-type)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817034.1 True 2450 mRNA 0.45 15 29962630 29974420

Neighbor

gene id symbol gene type direction distance location
ints12 ints12 coding downstream 132615 29823819 ~ 29830015 (-)
ppa2 LOC103361132 coding downstream 159011 29794781 ~ 29803619 (-)
cxxc4 cxxc4 coding downstream 224423 29708370 ~ 29738207 (-)
cdkn2a/b NA coding downstream 350893 29609150 ~ 29611737 (-)
LOC120557425 LOC102294808,LOC101473017,LOC107091121,LOC100696115,LOC102214471,LOC106949618,LOC103466417 coding downstream 377559 29569270 ~ 29585071 (-)
LOC120569234 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding upstream 53689 30028109 ~ 30043664 (-)
tbck tbck coding upstream 69519 30043939 ~ 30101128 (-)
dkk2 dkk2 coding upstream 177724 30152144 ~ 30166195 (-)
papss1 papss1 coding upstream 232081 30206501 ~ 30251628 (-)
lef1 lef1 coding upstream 304107 30278527 ~ 30320963 (-)
G8707 NA non-coding downstream 342146 29620019 ~ 29620484 (-)
G8704 NA non-coding downstream 347230 29615125 ~ 29615400 (-)
G8694 NA non-coding downstream 393649 29564868 ~ 29568981 (-)
G8610 smox non-coding downstream 591291 29370601 ~ 29371339 (-)
G8609 smox non-coding downstream 596149 29364466 ~ 29366481 (-)
G8790 NA non-coding upstream 31974 30006394 ~ 30007983 (-)
G8834 hadh,LOC103384097 non-coding upstream 297044 30271464 ~ 30273350 (-)
G8843 NA non-coding upstream 380018 30354438 ~ 30354652 (-)
G8880 NA non-coding upstream 475911 30450331 ~ 30450686 (-)
G8890 NA non-coding upstream 724717 30699137 ~ 30699343 (-)
G8701 NA other downstream 369007 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 622783 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 2667719 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3383815 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3426894 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 601452 30575872 ~ 30744878 (-)
G8975 NA other upstream 996968 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 1960217 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 2247537 32221957 ~ 32226423 (-)
lrba NA other upstream 2610304 32584724 ~ 32781154 (-)

Expression


Co-expression Network