tbck (tbck)


Basic Information

Item Value
gene id tbck
gene name tbck
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 30043939 ~ 30101128 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817035.1
GTCATTGATCACGTTCTCTCAGCTGTTTCCATCACATCGCAGAGGCAGGGAAGGAATTCATTTCAAACATATTTTATCAATAATTTCAAGTTAATTCTGTCGTCATGGCCATACAGCTTCTCCATTAAGCTTCTTGAAGCCAGTGGTGCGATGAGGCCCCTCAAAGATGCCCAGCTGGGGGCCTTCACCTTCTTTGCCTCAGCTCTCCCTCATGATGTCTGTGGGAGCAATGGTCTCCCTCTTACCCCAAACTCTATCAAAATCCTGGGACGTTTCCAGATCCTCAAGACCATCACTCACCCCAGACTCTGCCAATATGTGGACATCTCCAGAGGGAAACATGAACGCCTGATTGTTGTTGCTGAACACTTTGAAAGCAGTTTAAGTGATTTTCAAAAACAGGGGAAAACAGCCAGcCCAGAGACAGTTCTGCAGATAGCCTATGAGGTCCTTGAAGGTCTGGAGTTTATGAACAAACATGGTATGGTGCACAGAGCCCTCAGCGCACACAATGTGCTCATGGACTGCAAGGGGAATGTCAAGCTGGCAAAGTTCGGCCTTTATCACATGACGGATCATGGGGCCGACGTAGATTTTCCCATTGGGTACCCATCATACCTTGCTCCAGAGGTGATCGCTCAGGGCTCCTTTCACCCCAGTGACTCTTCCCATGATGCAGCTCCTCTGCCTTCAGGACCCAAGACAGATGTCTGGTCTCTTGGGGTTTTGCTCTTTGAATTATGTGCAGGTAGACGACTGCTGCAGAATATTCATATAAGTGAGAGATTGAAATTCATTCTAACCTTGGGTTGCATGGACGACATTGTCACCGTCCTTGCTGAGGAACATGGTTGCCTTGATACTATTAAGgagCTGCCTGAGAATGTTCTCGAGTTATTAAGGAAATGCTTGACATTTCTTCCATCCAAAAGGCCGACCCCTGCAGAGCTGCTGGGAGACCCTGTGTTTAGTGGCATCTCCTGCCTCTATACGCCCTTCCAGAAGCCTGTGAGTCTGTTCTCCTCTTCCCTGCGCTGTGCACATCTGGAGCTCCCAGAAGACATCAGTGACCTTTGCAAAGACGATGATGAAGACTACCTGTCAGAGCGGGCCATAGATGAGGTCTACCATCTGTGGTGTCTGGCAGGGGGAGACCTGGAGAAGGAGCTGACCAACAAGGAGATCATCCAGTCCAAACCTCCAATCTGCACACTGCCCaaTTTTGTCCTGGAAGATGGAGAGTCATTTGGCCAGGGAAGAGATCGGAGTTTCTTGCTTGACGACACAACAGTGACACTGTCTCTCTGCCAACTCAGAAATaGGCTAAAGGATGTAGCAGGAGAAGCCTATTACCCTCTACTGGAAGACGAACAGTCAAGTCTGCCTCAGTCCAACAGCAGCAATGAGCTGTCGGCCACCGTCACGCTCCCACTCATCATCCgcgagagagacacagagtaCCAACTCATCCGCATCATCCTCTTTGACAGGCTTCTCAAGGCCTATCCTTACAAGAAGAACCTTGTGTGGAAAGAGGCCAGGGTGGATATCCCCCCTCTTGTTCGAGGCCTGGCGTGGGCAGCACTGCTGGGCATTGAGGGCGACATTCAAGCCAAATATGAGAGCATAGACAAGGATACTCCCATaccaactgacagacagATTGAGGTGGACATCCCACGCTGCCACCAGTACGACGAGCTGCTGTCGTCTCCTCAGGGCCACATCAAGTTCAGGCGTGTGTTGAAAGCCTGGGTGGTCTCCCACCCTGACCTGGTCTACTGGCAGGGTTTGGATTCACTTTGTGCCCCATTCCTCTACTTGAATTTCAATAATGAAGCCCTGGCATATGCCTGCATGTCTGCCTTCATCCCCAAGTACTTGTACAACTTTTTCCTGAAGGACAACTCTCATGTCATTCAAGAGTACTTGACCGTCTTCTCCCAAATGATTGCCTTCCATGACCCAGAGCTAAGCAACCATCTAAATGAGATTGGATTCATCCCAGACCTGTATGCTATTCCATGGTTCCTGACTATGTTTACACATGTGTTTCCGCTGCACAAGATCTTCCACTTGTGGGACACGCTGCTGCTGGGTAACTCCTCTTTCCCCTTCTGTATCGGTGTGGCCATACTGCAGCAGCTCAGGGACCGTCTCTTGGCAAATGGCTTCAATGAGTGCATCCTACTCTTCTCTGACCTGCCAGAAATTGACATTGAGCGCTGTGTTCGTGAATCCATCAACCTCTTCTGCTGGACTCCAAAGAGCGCTACATATCGACAGCATGCTCAGCCACCAAAGGCCGCTGGTGACAACGGCTTTGGGAAAGCAGCAACATACTATTCGTCTGACTACCAGGACATGGCCAAGACAGACCTGTCTCGGGAGCCTCTGGCGCTGTGCGACCTGAAAGCAGAAGTATCCCCGAGGATCTCGGCCGAGGACTTAATCGACCTCTGTGAGCTGTCATTGGCCGGGCCCACCAAAAGGACCAAAGTCGGCAGGCCAAAAATCATTGCTGTCGACATCCGCAGTGTAGAGGACTTCAGCAGAGGCCATATTTCAGGCAGTATCAACATTCCCTTCAGCACAGCGTTCAGCCCTGATGGTGAGCTGGTGCAGTGTCCTTCAACAGGAATACTCCAGAACTACAGAGGACGTGTCATTGTGATCATTAGCCACCCCATGAAAAGTGCTGCTATGTTTGCAGCACACCTGGTCAAGGTAAATTTCCCACGGGTTTGTATCCTGGATGGAGGGATCAACAGGCTGAAGCCCACTGGACTCCTGACTGTCCCCTCCCCTCAGATCTGACCCCAGATAGGCTTCAGATGAAAAAAGGGACGAGTTGAAAGACTGTATTTTGCACTTtgagctgatttttttttaacacattctAATTAAACTCTGGtgcaaaatgaattaaaaaatgcattgaaaTAATCCCCTTCTTAATCCAGTTTGAATTCATCAACAAATATACAGGGCTATCACTTTGTTATTTTCTGTCTCAAAACAAGAATGATTGAATGAATTATTTCTGGAACAACTGCTTAATTTTGTTGTAGCTTTGCACTGATAAATTGAGCTGTCTGTGGATCAGCTGATCTAGGGAACTGTGTTATAAACTCAGTGGCTACTTTATAGGgtaatgcaatccaatacaacTGTTCTGCCATGAAGTCTAATTTTATGATGACTATAATATTCAATGTTTAAGCATTAGGCTAATAGTTAGAGGTGGTGGTGTTGTACCCAGCCACATTATATTCATAGGTGTTTCTAACATTCTGCCTGCCTCATGTATGTAAATAGGAAGGACAAACAATTAGAAACACCTCTAACTATAGTGCAGTACAACACCGCCTTTTACTATGACCTCAATAATAAACATATCATTAAAACACTTTTCTGAGAATGTCAACAGAAACTGAAAATGTTAAACTTTTTGAAGGCTGAGAATATATGGCAGAGTTGTATTGAGTTGCATGGAATTGCACAGGAGTACCAAATAAAATGGCCACTGAATCTATGTTTGTGttagaaacaataaaaataactcAGTGA

Function

symbol description
tbck Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Predicted to act upstream of or within protein phosphorylation. Orthologous to human TBCK (TBC1 domain containing kinase).

NR:

description
PREDICTED: TBC domain-containing protein kinase-like protein

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K17544 TBCK; TBC domain-containing protein kinase-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817035.1 True 3570 mRNA 0.47 26 30043939 30101128

Neighbor

gene id symbol gene type direction distance location
LOC120569234 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding downstream 275 30028109 ~ 30043664 (-)
LOC120569156 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding downstream 69519 29962630 ~ 29974420 (-)
ints12 ints12 coding downstream 213924 29823819 ~ 29830015 (-)
ppa2 LOC103361132 coding downstream 240320 29794781 ~ 29803619 (-)
cxxc4 cxxc4 coding downstream 305732 29708370 ~ 29738207 (-)
dkk2 dkk2 coding upstream 51016 30152144 ~ 30166195 (-)
papss1 papss1 coding upstream 105373 30206501 ~ 30251628 (-)
lef1 lef1 coding upstream 177399 30278527 ~ 30320963 (-)
LOC120560609 casp6 coding upstream 300312 30401440 ~ 30407692 (-)
pla2g12a pla2g12a coding upstream 317367 30418495 ~ 30424022 (-)
G8790 NA non-coding downstream 35956 30006394 ~ 30007983 (-)
G8707 NA non-coding downstream 423455 29620019 ~ 29620484 (-)
G8704 NA non-coding downstream 428539 29615125 ~ 29615400 (-)
G8694 NA non-coding downstream 474958 29564868 ~ 29568981 (-)
G8610 smox non-coding downstream 672600 29370601 ~ 29371339 (-)
G8834 hadh,LOC103384097 non-coding upstream 170336 30271464 ~ 30273350 (-)
G8843 NA non-coding upstream 253310 30354438 ~ 30354652 (-)
G8880 NA non-coding upstream 349203 30450331 ~ 30450686 (-)
G8890 NA non-coding upstream 598009 30699137 ~ 30699343 (-)
G8952 NA non-coding upstream 708243 30809371 ~ 30899158 (-)
G8701 NA other downstream 450316 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 704092 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 2749028 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3465124 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3508203 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 474744 30575872 ~ 30744878 (-)
G8975 NA other upstream 870260 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 1833509 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 2120829 32221957 ~ 32226423 (-)
lrba NA other upstream 2483596 32584724 ~ 32781154 (-)

Expression


Co-expression Network