LOC120569234 (LOC102312368,LOC100706304,LOC102797228,LOC101468181)


Basic Information

Item Value
gene id LOC120569234
gene name LOC102312368,LOC100706304,LOC102797228,LOC101468181
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 30028109 ~ 30043664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817038.1
GCAAGAATTGTTCATATGTCGTGTAAGCATTTCATCACCACAGCTGACTATTTACTAATCCTACTGACTGGACACTCCCACAAAGGTGTGTGTATAAAAAGAGCAATCAATGGTGACTACTTTTATCAAAAGAACAGTTCATCAAAGGAACATTTTGGTCTCATTAACAGGATTCTGCTGCTTTCCAGAGTCAAAATGGTGAATTATGAAGTGACTGTATCCACTGGCAATCTTGTCGGTGCCACCACTTTAAACAACGTCTTCATTAAGCTGGTAGGAACAGATGGGGAGAGCAAACGCAAGTGGCTCATGGGGCTCAAAGGAGCTTCATCCTTCACCATTGGAGCAGTGTCTAGTTTTACCGTGTCCTGCCCTGGCTCCATTGGAAAGCTGGTCCTGATAGAGCTGGACAAACAGTGTCTCCCACTGTTCCCTGAAGACTCCTGGTTCCCCACCAAGGTGGAAGTGAAATCTCCTGAAGGAGATACCTACAACTTTCCCATCTACCGCTGGATCACTGACAGTGAGGTGTACCGCTTCCGAGAAGGAACAGCTCTGACAGTCTTCGAAGACAACCATCATCTTGGCAGGTACAGTCGGCAGAAGGAACTGGATCAACGAGAGAAGGACTATCGCTGGCATGTGTATGTAGAGGGAATACCCCACTGCATCAAGGCAGAGAACCCTCTTTCTTTGCCTTGTGAAGTCCGCTTCTCCTTTACTAAGACCACAGAGTTTCTCTATACTGCATCCACCGGGCTGACTGAACTGCAACTTAAGGGTCTGGCTAATTGCAAGGAGAAGTGGACAGATATTGATGCTATCAATCGGGTGTTCTGCTGCAAACGGACTGATATATCAGACTATGTCCAGGAACATTGGAAGGAGGACGCTTTTTTTGGCTACCAGTATCTAAATGGTGTCAACCCCATCTTGATCCGACGTTGTTCAGCTCTGCCCGATAACTTTCCTGTCACTGACGACATGGTCTTCCTCCGTGGACAGTGTAACTTGACAAATGAAATGAAGAAAGGCAACATATTCCTGTGTGACTACAAGCGTTTGGATGGAGTGAAAGCAAACACCATCAATGGGAAGAAGCAGTACTTGATGGCTCCACTCGTCCTGCTCCACAAAACACCTGATGATAAACTGATGCCAATTGCTATCCAGCTGAAGCAGACTCCATCAGATGACAACCCCATCTTCTTTCCTACCGATTCTGAGTACGACTGGTTGATGGCCAAGATTTTTGTGAGAAGTGCAGATTTCAGTGAGCATCAACTCAATGTTCACCTGCTGCGCACTCATCTGCTGGCTGAAGTGTTTGCAGTGTCACTGCTGCGTAATGTGCCAATGGTGCATCCACTGTACAAGCTCCTCATACCTCACACTCGCTACACTCTGCAGATCAACCACTTAGCTCGACTTGTTTTAATATCTGAGACTGGAGTTTTTACAAAGTTTGCAGCTTCTGGTGGAGAGGGTATGATGACAATCCTGAAGAGATCACTGTCCTCAATGACCTACGGCTCCCTCTGCATACCAGACGACATTGCTGAGCGTGGTGTGGAGGCTGTGCCGAACTTCTACTACAGGGATGATGGACTCAAGCTTTGGGATATCATCCAAAGGTTTGTGCAGGGAGTGCTCAGCTTCTACTACAAGAACGACGCTGAGGTCCAGAAAGACTCCGAATTGCAGAAGTGGATTTCAGACATTTTTGAACATGGATTTCTTTCCCAAGCATGCACAGGAATTCCACAGAGCTTTACCACCGTGGCTGAGTTGGTCAAGTTCGTCACCATGGTGATCTTCACTTGCTCAGGACAGCACTCAGCTGTGAATTCTGGACAGTATGACTATGGTGGCTGGATGCCCAACACTCCCATCTCTCTGCAACTTCCTCCACCAACCACAAAGGGAGAAACAAGCGAGGCCACGATGCTGCAGACATTCCCTGACGTCAACACAACAGTTCAGGGAATGTCCACCATGTGGCTACTCAGCAAGCAGTCGTCTGACTTCGTCCCTCTTGGCCAATACCTAGAGGACCATTTCAGTGAGAAGATTCCCAGCAAGCTGATAAAGGATTTTCAAGGGGAGCTTGAAGTGTTAAGTTCGGTCATCAACGTCAGAAACAAGAGGCTGGAGGTCCCATACACATACATGGATCCAAAAAAGCTAGAAAACAGCGTGGCCATTTAAATATCAGAAGGTGTGACCTCCTCAGCTGTTGGCCAAATTCAGCTTCAtattaaaggtactctaagcaaTGTCACACGCATTTTTAggcacaacattttttgtcacatacagcaaacctctcctcactatccgcgagctgccgataccctgaacacactgtaaaaaaaaaaacacggtctctgtaaacagcccagggtccacaaaaacataacaaaccgTTTTCCAGCgttcagccaataaccgacaagaaggatttggggtggAGGTTGGGTGGGTTAGTTTGCTAGTTTTAAATCATACGCATCCTAAATCTTCTTAGTTTATCAATGAAAaattttaatttacaaatgaaaaataaaaaatgtgaagCTGCTGCATTGAGAAGCTTCTTATAAACACATGTATCTTtcagaaacaaaatgtgtcaatTTGCACTTGTCTGCCCTCATTGgactattgttttattattttccgTCTCAACACAAGAATGTTGTATTTTTTCTGGGCTGCTCTACagcagtgtgtgttgtgtagtagTCTTTCACTGATAACTGAGCTACAGCTTGTTCTGTATGTGAGATTGTTCTGTGCCAGTTAATctacagaacaaaatataaattattttgagaaaacaatgaatgttttatttatttatttttatatatatatatatatatatatatatataactagtATTAGCTTTGTTTACTGtagttgttttcattttttaacattttactgATGACGAAACTTTGAATCAAGCTTTTTTCAGTGAACCCTTTTTGCTagagaaattaaaacaaaagtgGTGAATATAAAATGATGTGGCTGATTTGTGATGTAATAATCACAGCAAAGCCCTAATTGCACAgtgctacacaaatttgtttatTGTTCACAATGATTAAAAATTTAACTTCTTAATAA

Function

NR:

description
PREDICTED: hydroperoxide isomerase ALOXE3-like

GO: NA

KEGG:

id description
K08021 ALOX12B; arachidonate 12-lipoxygenase (R-type)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817038.1 True 3135 mRNA 0.43 15 30028109 30043664

Neighbor

gene id symbol gene type direction distance location
LOC120569156 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding downstream 53689 29962630 ~ 29974420 (-)
ints12 ints12 coding downstream 198094 29823819 ~ 29830015 (-)
ppa2 LOC103361132 coding downstream 224490 29794781 ~ 29803619 (-)
cxxc4 cxxc4 coding downstream 289902 29708370 ~ 29738207 (-)
cdkn2a/b NA coding downstream 416372 29609150 ~ 29611737 (-)
tbck tbck coding upstream 275 30043939 ~ 30101128 (-)
dkk2 dkk2 coding upstream 108480 30152144 ~ 30166195 (-)
papss1 papss1 coding upstream 162837 30206501 ~ 30251628 (-)
lef1 lef1 coding upstream 234863 30278527 ~ 30320963 (-)
LOC120560609 casp6 coding upstream 357776 30401440 ~ 30407692 (-)
G8790 NA non-coding downstream 20126 30006394 ~ 30007983 (-)
G8707 NA non-coding downstream 407625 29620019 ~ 29620484 (-)
G8704 NA non-coding downstream 412709 29615125 ~ 29615400 (-)
G8694 NA non-coding downstream 459128 29564868 ~ 29568981 (-)
G8610 smox non-coding downstream 656770 29370601 ~ 29371339 (-)
G8834 hadh,LOC103384097 non-coding upstream 227800 30271464 ~ 30273350 (-)
G8843 NA non-coding upstream 310774 30354438 ~ 30354652 (-)
G8880 NA non-coding upstream 406667 30450331 ~ 30450686 (-)
G8890 NA non-coding upstream 655473 30699137 ~ 30699343 (-)
G8952 NA non-coding upstream 765707 30809371 ~ 30899158 (-)
G8701 NA other downstream 434486 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 688262 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 2733198 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3449294 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3492373 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 532208 30575872 ~ 30744878 (-)
G8975 NA other upstream 927724 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 1890973 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 2178293 32221957 ~ 32226423 (-)
lrba NA other upstream 2541060 32584724 ~ 32781154 (-)

Expression


Co-expression Network