XLOC_004615



Basic Information


Item Value
gene id XLOC_004615
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 16742395 ~ 16874703 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00010910
ttttaatacagcaaaacactggctattttacagttatttactgcataatctacagtaagggttaacagtgtgtgtaatgcattattaacatccaaattcatgtttggtaacattagttaatgcaccatgagttatcTATTACCAAtgaaaaactttattttcattgaCTAACAAGCAAATACTTACTGTTACCAATAGTGCATATCAAAACAATATTGTTGAATGCTGAGATTTGTacctttaattatattttgtgtgGTAATTTGATCCAGTTATACAGAATTGTATTACATAATCAGAATAGCTTCGTCTTAATCTGCTCCATTAAATTCAACACAGGTCAACTGCAAgaatcactttaaacatttaatatgtatgGCATTCCTACAtgatatgcaaataaacacaGTACAGACTTTTGCCATGCcagaaaattttatatttatccaTTTGCAGGTCAAATAGATCCAGTACAGAATTCTCATTCTTGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00010910 True 491 lncRNA 0.30 2 16742395 16874703

Neighbor


gene id symbol gene type direction distance location
XLOC_004614 NA coding upstream 157341 16583373 ~ 16585054 (+)
XLOC_004613 NA coding upstream 172351 16567854 ~ 16570044 (+)
XLOC_004612 NA coding upstream 250589 16490198 ~ 16491806 (+)
XLOC_004611 NA coding upstream 254828 16486965 ~ 16487567 (+)
XLOC_004610 kif20bb coding upstream 263104 16452575 ~ 16479291 (+)
XLOC_004616 zgc:174153 coding downstream 74688 16949391 ~ 16951851 (+)
XLOC_004617 pank1b coding downstream 78712 16953415 ~ 16964840 (+)
XLOC_004618 dre-mir-107a coding downstream 85990 16960693 ~ 16960781 (+)
XLOC_004619 slc16a12b coding downstream 93012 16967715 ~ 16986968 (+)
XLOC_004620 ch25h coding downstream 168051 17042754 ~ 17043874 (+)
XLOC_004603 NA non-coding upstream 793844 15948036 ~ 15948551 (+)
XLOC_004624 AL731788.1 non-coding downstream 470847 17345550 ~ 17345667 (+)
XLOC_004625 NA non-coding downstream 549728 17424431 ~ 17427380 (+)
XLOC_004634 BX005075.1 non-coding downstream 1250955 18125658 ~ 18125774 (+)
XLOC_004635 NA non-coding downstream 1335168 18209871 ~ 18228004 (+)

Expression



Co-expression Network