LOC120569296



Basic Information


Item Value
gene id LOC120569296
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7331956 ~ 7372558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039817123.1
TgtcatttatttctatttcttcgAAATGTATTCTGCAGTGTCACTGTAACTTCCTCATTTCTGAGAAAATGCAAAAGATGAAATCTTAATACTGAAAATAAGGTCATGGTGCCACTTTGAAGGTCTGACAATGGTCTCAGACTCCTCTATAAAATGTCCCTTCCTTCTGACTGTCTTCACTGCAGCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGTTGGAAACACTGGGGCTATGGATCAGAATAAGGTCCAGAAACTTGCAAAATACATCCTGAACAACTGCTTCCTAGGAGAAGGACAGGTCAGTTTGGCTGTAAACTTCCCAGCGAACCTGGACCAGAACAGTCTTCACAAGATCTCAGAAGAATGTGCACTTATAAAAGATAAGATCGGACAACAAGATGGACTGTACAAAGGTACCATTATGGTTGcagcaaaacataaaacaattcAATCAAAGAGTAGACAACCATATACTGAGCATGCAGAGGAACGAGTACTGGACAACATGCAACACTTAGCTGCCAATAGTGCGGGTAAAAGTCTGATCTTCTATTCTTTCCTTTCTCCATGCACCAAGTGTACAACGCAAGGCGGTCGTCATAATATCTTAGACAAGATTAAAgataaaattgacaaaaaaggaTGGAACGACATTGCCTTTGTGTTTTCCAAAGTATACACCAGGACCAAAAATTACAAGGGGGATGTTCCCTTATTTGAAGATACAATTAAAACCACCCTTGAAAATCTTGGAACAACTATATTTGATGACAACATATTTCATTGTTACTCCCCAAAAAGAAGTCCATTCAAATGCATCAAGTGCCTCAGCAATGCATCTCCAAGACATGTAGATGAAAACTGTCTTACAAACGAAGACGACCTgtatagctcagttggtagagtgggcgctcatatatag
>XM_039817131.1
TTCAAGGAAACGAGCCATGATGACTCGTAGAACAGGTCCGTCCACCGCTTGAACTCATGATATATAAACTCAGATTTTCCTGTCTgaagacacaaaaaaagaaagaaaagagaagaagaaagaaacagtaatagaaacaaaGGATATTTTTACTCTACTtggaacatttgaaatTTTTTAGACTGACAAACCCTGTGAGCAACAATACTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGTCTTCAGCCTGTCTGTTGGAAACACTGGGACTATGACTCAGAATGAGGTCCAAGCAATTGTAAACTTCATCCTGAACAACAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGGGAAGTTACACCTCCAAGGAACACCACAGAGCTGGGTTAAATCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGTTTTTAGACTGACAAACCCTTTGAGCAACAATCCTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGTTGGAAACACTGGGGCTATGGATCAGAATAAGGTCCAGAAACTTGCAAAATACATCCTGAACAACTGCTTCCTAGGAGAAGGACAGGTCAGTTTGGCTGTAAACTTCCCAGCGAACCTGGACCAGAACAGTCTTCACAAGATCTCAGAAGAATGTGCACTTATAAAAGATAAGATCGGACAACAAGATGGACTGTACAAAGGTACCATTATGGTTGcagcaaaacataaaacaattcAATCAAAGAGTAGACAACCATATACTGAGCATGCAGAGGAACGAGTACTGGACAACATGCAACACTTAGCTGCCAATAGTGCGGGTAAAAGTCTGATCTTCTATTCTTTCCTTTCTCCATGCACCAAGTGTACAACGCAAGGCGGTCGTCATAATATCTTAGACAAGATTAAAgataaaattgacaaaaaaggaTGGAACGACATTGCCTTTGTGTTTTCCAAAGTATACACCAGGACCAAAAATTACAAGGGGGATGTTCCCTTATTTGAAGATACAATTAAAACCACCCTTGAAAATCTTGGAACAACTATATTTGATGACAACATATTTCATTGTTACTCCCCAAAAAGAAGTCCATTCAAATGCATCAAGTGCCTCAGCAATGCATCTCCAAGACATGTAGATGAAAACTGTCTTACAAACGAAGACGACCTgtatagctcagttggtagagtgggcgctcatatatag
>XM_039817140.1
TTCAAGGAAACGAGCCATGATGACTCGTAGAACAGGTCCGTCCACCGCTTGAACTCATGATATATAAACTCAGATTTTCCTGTCTgaagacacaaaaaaagaaagaaaagagaagaagaaagaaacagtaatagaaacaaaGGATATTTTTACTCTACTtggaacatttgaaatTTTTTAGACTGACAAACCCTGTGAGCAACAATACTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGTCTTCAGCCTGTCTGTTGGAAACACTGGGACTATGACTCAGAATGAGGTCCAAGCAATTGTAAACTTCATCCTGAACAACAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGGGAAGTTACACCTCCAAGGAACACCACAGAGCTGGGTTAAATCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGTTGGAAACACTGGGGCTATGGATCAGAATAAGGTCCAGAAACTTGCAAAATACATCCTGAACAACTGCTTCCTAGGAGAAGGACAGGTCAGTTTGGCTGTAAACTTCCCAGCGAACCTGGACCAGAACAGTCTTCACAAGATCTCAGAAGAATGTGCACTTATAAAAGATAAGATCGGACAACAAGATGGACTGTACAAAGGTACCATTATGGTTGcagcaaaacataaaacaattcAATCAAAGAGTAGACAACCATATACTGAGCATGCAGAGGAACGAGTACTGGACAACATGCAACACTTAGCTGCCAATAGTGCGGGTAAAAGTCTGATCTTCTATTCTTTCCTTTCTCCATGCACCAAGTGTACAACGCAAGGCGGTCGTCATAATATCTTAGACAAGATTAAAgataaaattgacaaaaaaggaTGGAACGACATTGCCTTTGTGTTTTCCAAAGTATACACCAGGACCAAAAATTACAAGGGGGATGTTCCCTTATTTGAAGATACAATTAAAACCACCCTTGAAAATCTTGGAACAACTATATTTGATGACAACATATTTCATTGTTACTCCCCAAAAAGAAGTCCATTCAAATGCATCAAGTGCCTCAGCAATGCATCTCCAAGACATGTAGATGAAAACTGTCTTACAAACGAAGACGACCTgtatagctcagttggtagagtgggcgctcatatatag
>XM_039817152.1
TgtcatttatttctatttcttcgAAATGTATTCTGCAGTGTCACTGTAACTTCCTCATTTCTGAGAAAATGCAAAAGATGAAATCTTAATACTGAAAATAAGGTCATGGTGCCACTTTGAAGGTCTGACAATGGTCTCAGACTCCTCTATAAAATGTCCCTTCCTTCTGACTGTCTTCACTGCAGCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGTTGGAAACACTGGGGCTATGGATCAGAATAAGGTCCAGAAACTTGCAAAATACATCCTGAACAACTGCTTCCTAGGAGAAGGACAGGTCAGTTTGGCTGTAAACTTCCCAGCGAACCTGGACCAGAACAGTCTTCACAAGATCTCAGAAGAATGTGCACTTATAAAAGATAAGATCGGACAACAAGATGGACTGTACAAAGTGGGAGCTTAATAAAGTGACACGCTggggacacaaacacatgtcaGAAGTTTGCTTTGGTCCAATCATTAACCAGCATTTTCCTGCACACGAGGTTTTAAGTGATTGTTTACCTTAACACGGACTGATTTTGGGGTTGTTCCATTTAACTGTTGTGAATTACCAAATGCCTGCTCTTAATGGTTGAGTCTCTTTAAatcagagtgtggtctagacttactctgtctgtaaagtgtcctgagataactacTGTTATAATTAATAAGAATCATGTCCTTCAATGACTCTCAGTGGTTTTAGGTTAGGAGGAATTTTCTGTCTAtccaaataaaaaactaaactaactgAAATACGGTAGACTGCTGCAGAGTTTAAACAGCCAGATAATTAAATGTTTAAGTGTATTATAATTATTGCCAATATAAACAAAATTGAAAGAGATTTGAGATTTTGAACTGAGATTTGGTGAAAAAGTAGGCTGACTCCATTCAACCTAACCAGTTACTGTAACGCTGAACATATTCTACCCTATTCCAAAAAGTCAAATAGTAAAAATGTTGTTTATCAAATACTAATCATGTTAAATGTGGATGTTTAATGTGTATCAACCTCAGTATTTACATGAATCATGTCATTGTACTCAATACTTGTGTAAAGCAAACTGAATCCTCTGATGTTGTGCTCTTTCTGATTAAAGCTTAGCTCAGCATCCA
>XR_005640861.1
TTCAAGGAAACGAGCCATGATGACTCGTAGAACAGGTCCGTCCACCGCTTGAACTCATGATATATAAACTCAGATTTTCCTGTCTgaagacacaaaaaaagaaagaaaagagaagaagaaagaaacagtaatagaaacaaaGGATATTTTTACTCTACTtggaacatttgaaatTTTTTAGACTGACAAACCCTGTGAGCAACAATACTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGTCTTCAGCCTGTCTGTTGGAAACACTGGGACTATGACTCAGAATGAGGTCCAAGCAATTGTAAACTTCATCCTGAACAACAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGGGAAGTTACACCTCCAAGGAACACCACAGAGCTGGGTTAAATCAACACCTTGTCTCCAGACACAGAGGACGACAGCTTCAGAGACCTCATCGAACATCTTTCTCCTCCAGAAAAGTTTTTAGACTGACAAACCCTTTGAGCAACAATCCTGAAGATGGCTGGCCTGTGTTGGATGGCTGTGGTGCTGGCCTTCAGCCTGTCTGTTGGAAACACTGGGGCTATGGATCAGAATAAGGTCCAGAAACTTGCAAAATACATCCTGAACAACTGCTTCCTAGGAGAAGGACAGGTCAGTTTGGCTGTAAACTTCCCAGCGAACCTGGACCAGAACAGTCTTCACAAGATCTCAGAAGAATGTGCACTTATAAAAGATAAGATCGGACAACAAGATGGACTGTACAAAGTGGGAGCTTAATAAAGTGACACGCTggggacacaaacacatgtcaGAAGTTTGCTTTGGTCCAATCATTAACCAGCATTTTCCTGCACACGAGGTTTTAAGTGATTGTTTACCTTAACACGGACTGATTTTGGGGTTGTTCCATTTAACTGTTGTGAATTACCAAATGCCTGCTCTTAATGGTTGAGTCTCTTTAAatcagagtgtggtctagacttactctgtctgtaaagtgtcctgagataactacTGTTATAATTAATAAGAATCATGTCCTTCAATGACTCTCAGTGGTTTTAGGTTAGGAGGAATTTTCTGTCTAtccaaataaaaaactaaactaactgAAATACGGTAGACTGCTGCAGAGTTTAAACAGCCAGATAATTAAATGTTTAAGTGTATTATAATTATTGCCAATATAAACAAAATTGAAAGAGATTTGAGATTTTGAACTGAGATTTGGTGAAAAAGTAGGCTGACTCCATTCAACCTAACCAGTTACTGTAACGCTGAACATATTCTACCCTATTCCAAAAAGTCAAATAGTAAAAATGTTGTTTATCAAATACTAATCATGTTAAATGTGGATGTTTAATGTGTATCAACCTCAGTATTTACATGAATCATGTCATTGTACTCAATACTTGTGTAAAGCAAACTGAATCCTCTGATGTTGTGCTCTTTCTGATTAAAGCTTAGCTCAGCATCCA

Function


GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039817123.1 False 1017 mRNA 0.41 3 7332987 7336645
XM_039817131.1 False 1312 mRNA 0.42 8 7332987 7372558
XM_039817140.1 False 1273 mRNA 0.42 7 7332987 7372558
XM_039817152.1 False 1220 mRNA 0.38 4 7331956 7336645
XR_005640861.1 True 1515 transcript 0.40 9 7331956 7372558

Neighbor


gene id symbol gene type direction distance location
LOC120565143 NA coding downstream 24080 7292547 ~ 7307876 (-)
LOC120562943 NA coding downstream 76611 7249581 ~ 7255345 (-)
LOC120565981 NA coding downstream 85543 7241820 ~ 7246413 (-)
b3gnt2a NA coding downstream 108094 7158870 ~ 7223862 (-)
zgc:66455 NA coding downstream 176633 7140734 ~ 7155323 (-)
usp34 NA coding upstream 68512 7441070 ~ 7551615 (-)
xpo1a xpo1,LOC103359566 coding upstream 181474 7554032 ~ 7582024 (-)
LOC120569612 NA coding upstream 185209 7557767 ~ 7557898 (-)
LOC120569585 NA coding upstream 199763 7572321 ~ 7572457 (-)
fam161a NA coding upstream 212837 7585395 ~ 7601539 (-)
LOC120568064 NA non-coding downstream 55413 7271819 ~ 7276543 (-)
LOC120564702 NA non-coding downstream 63567 7263691 ~ 7268389 (-)
G2392 NA non-coding downstream 164129 7166432 ~ 7167827 (-)
G2367 NA non-coding downstream 204547 7126802 ~ 7127409 (-)
G2362 NA non-coding downstream 245671 7085358 ~ 7086285 (-)
LOC120568185 NA non-coding upstream 61358 7433916 ~ 7441067 (-)
G2451 NA non-coding upstream 63916 7436474 ~ 7438272 (-)
G2743 NA non-coding upstream 259816 7632374 ~ 7633344 (-)
G2732 NA non-coding upstream 269564 7642122 ~ 7662768 (-)
G2750 NA non-coding upstream 349379 7721937 ~ 7722318 (-)
commd1 commd1,LOC102781613,LOC103150757 other downstream 91806 7225340 ~ 7240150 (-)
trnae-uuc_1 NA other downstream 308768 7023117 ~ 7023188 (-)
trnae-uuc NA other downstream 310311 7021574 ~ 7021645 (-)
LOC120571633 otx1,LOC102233826 other downstream 314297 6999171 ~ 7017659 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other downstream 392969 6889288 ~ 6938987 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other upstream 276284 7648842 ~ 7690587 (-)
G2752 NA other upstream 367266 7739824 ~ 7763948 (-)
capn9 capn9 other upstream 563382 7935940 ~ 7957621 (-)
G2840 NA other upstream 834694 8207252 ~ 8209535 (-)
wipf2a NA other upstream 1063241 8435799 ~ 8501162 (-)

Expression



Co-expression Network