LOC120569430


Basic Information

Item Value
gene id LOC120569430
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8801253 ~ 8817185 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817302.1
CTGCTGAAACCCAGGTGAGCTGAGAGGGGCGGCGCTTGGCACAATATGTGAGCTGTCAGTGGAACCAACAGGGCAGcTGTTTCTTTAAGGTGCAGGGTGCTGCACatgatttcatttcatttaccaGTCATGAAGTAAAGGAGAGGCCTGTTGCGCATAGAGACTCTAGAGGGGATCTGGCACCTAATGGAGTCCAATCTGTCCTGCCTGTCTTCACTGAAAGAAGAAGACAATGTGGTCTACGTCCAGCCACATTACAAAGAATCCTACCGCCTGGCCATTTATGCCCTCCTCTGTGGAGGCCAAGAGGCCTACGAGGAGTTCCTCCGAGCCGAGCAGATAAACCACTTCCTATCAGAGAAGGAGATCCTGTTCATTTTGGAAAATGCAGAGTTACCAGCGGTGGAGGAGGAAGACACCTCTGAGGGGAAACGGGCCACAGACGAGGCCAGACCCTCCACCTACTTCCCAACCGAGTCGGACGAGGAGGTGCCCAACCTGGACCTGGGCTGGCCGGAGGTGTCTCTGGAGGACATGGACACCAACATCAGCCTGCTGTtccacccacccagacaaaacACTCCGACCATTAAAGAAGTGGTTCGCAAGCAGATACAGGAGGCGAGGAAGGTTATTGCCATAGCGATGGACGTGTTCACTGACGTCGATATTTTCAAAGAGATCATCACTGCCACGTTGAGGGGAGTGGTAGTCTACATCCTCCTGGATGAAGCCCAGTTCAAGAGTTTCCTCACCATGTCACACAGGGTGGGCGTCAACATTCAAGACTTCAAGAACCTTCGTGTTCGGACGGTTCAGGGTCAGCAGTATCAGTGTCAGTCCGGGGTGAAGTTCCATGGAGATTTGGAGCAAAGATTCCTTATGGTGGACTGCAGAACAGTGATGTATGGAACATACAGctaCACATGGTCGTTTGAGAAGATCAACCTCAGCATGGTCCTGGTGATCACAGGTCAGCTGGTTGGCTCTTATGACGAGGAGTTTCGAAGACTGTACGCTCGCTCCTCACTTCCTGTAGTTCTGTCCAGGGAGAAGTCATCTGTCCTGCACCTAAGAGACACTGTGGGCCTGCAGAGCCCAAATTCCAGCCAGCTTTCCCTCCACCAAATTCACACAAGACCCAAAGTAATGCACGGCATGAGGAGTGCTCAGGATGACAGGCTTAATAATGCCGCCATGATGACCAGGGGCCTGAGCGTGCAGGAGAGACTGCATCAATCTCACTGTTTCGACATGGGAAATCTGGTGCGGGGACACAGCTATGGCGGAGAACTGCAGAATATAAACTCCATGACTCGGTTAAGGATGGGGACCAAGAACATCGGAGTCCCTGTTGCTCCCGAGAAGACAGCACCTAACGTGAGGGGGGGCGGCGACTCGCTGCTAACAAACAGGATGTCTCAGCAACACATTAGGCACCAGACTCGCTATGGAGCGGACCAGAATCTGATACCGTTCAACTCTGAAACATCCCTCAACAGGTGGAAGATAGACACATACTTTAATGACAGCAACGTGCCTCTAGATGCATCATACGATGCATTATCCCCAATGCCATCTCCGTATAGTAGCCACACAGGCTTAAACGAGCAACAGTCACAGCTGATTCACAGCAGGTCGAGGGACATAAAGTCCAGGATGGAGGAATTGAGGCAGAAGAGGCTCAGTCTGCAGGAGTACAGCAATCTCAGGCAGAGCCAAGAGTCATTGAGGTCTATGTATCCGACTGTGGAAAGACCTAAATTTGTGTCCTTATTAAGAGGTCTGGACATGCGGCAGAGTGTGGCAGAATTAGAGCCAAATACAGAAAAAGGTTGCAGCCTGGAACCAGCCAATCCCAGAGACAGTGAGCCAAATAAAGGAGGCAACAAAAGAGAGCAAACTTTCCCTGATGGCCACCACTCTGCCTCTCACTATGACGTCACAATGGTTCAAGATCGAAAGAAAACGCAGACGTACGACTGGCACGAGCCTCTTTCCAGGACAACCTCAGCTGCCGATTTAGATATGAAACTAAACGATCCATCGCTCAAGCTCTCTCATTTGCATCCCAGCGGTCTCCAACACCCAAGAGCGATGGAGTCTTTGACTGAGATCCCTGAAGAGAAAGAGGGTTCACGTGTCAACAGTTCGGACTCAGCTGCATTTAAAGATGAAAATGAGGAGATTCGCAAAGACAAGAAAGCTGTTCCAAAGGAGAACACTGTGAAATCTAGCGTACCTGCTGAATCACAGCGCCAGGATCAAGCCAAAGGAAGACATGGTTCTGTAGGTAAGGCAGCCAACAGCTCAGGCTCATCTGCTCCAAGAGAAGGAATGAAATCAATATCCAATGAGATACAAACTGCCCCAAAAATCTTAAACACTTCTACAGGACCTCAGCATGCCGTCGAAGCTAAGAGTAGTCACATGGAAAAAAAGCACACGCAGCGAAAGGAACCACCCCTTCAGAGGAAGAATTCCTTGAGAATGAAAGTATATTCGATGCTTTCCCCAGACGAAAACAAAGCATCCAAAAAAGACGAGAAGTCACTCCAAAGAAAGGCCTCACTGAGATCGTCGCAGAATCACTCAGGATCAAAACAACCACTCAGAGCAGACCATTCACAGGCACCTGCGCCAGAGCAAACAACAAAGAAAGGTCAATCGCCGAGCATCTCCAGGTCGCAGAGCTCTCTCGGTAGTCAACCGGAGACAGAGAAGCATAAATCTCCATTCCAAAGACTGTCTCCTCAGCGTTCAAGCAAAAAAAAGCCCAATCCAGCAGGAGAGCCGGACCGAGGCGCAAGGAACACTCTGGACGACGAGGCAGCGACTCTCTATCACACCAGAAGAGATAAAGTCTACAGTCGATTTGAATATTATCTTAGCGCTGACAGTATTCCTCAGGATAAATCAATGACAAGGGCAAGCATGTTGCCCTCCGAGAAAGACAGAGGGTCTTCCCCGAACAATCATGACTCTGGTTATCCAATGTATGAGACGCAAAGTGGCACTGACAACAAACTGGGAAGATTCATGCAGCGAGTAGGAAATCTAATAGGAAAGAACAAGTAGAGTTGTAGGAAAAGAGGAAGGCCACCAAGTGCTCAAGAATGAAGGCACTAATCCATGATCtgtttattgattgattttggttcccacacagagacaaagatgcTGTATGTGGTCATCTCTGCAGTATGCTACGTTTTTCTTTTGATATGTTTGATAATGTAGCTATGATCTTATCAGGGAGGAAGCTGAGTCGATATGATAATACCGGTAAGTAAAGGTGTTTACAGATGAAGTTATAGCAGGGTGAATATGACAGTAGCGCTTGCAGACACAGAAAAATGTGTTATCAAGTGAGTTGAATTGTGTGAAAAGACATCTGTCTTTATATTGAAAGTGTTTGTTCTTTTTGAAAGTAACAATTACAATGCTTTTTAGCTtgccatgaaaagaccaaaaccaacagtgAATGTAGGGGGACTGAACATCCAGAATAATTCGGGACAGTAAGGAATTACAAGCAGTTGTCCAGAGTCCTGTCCTGTTCGTCCCAAAAATAAGGCTAAACCTGAGTTTTGATTAGTTATAGCCTAATAAAACATGAGATACTGattattgtgattatttttggtGTTGCCCACAGATGgctgttatagttttttttatttttttttataattatttttattatttccatCAAGAAGCAATACATATATCAATATACTGTGTAATCACACTCCAAACAGGATACATTTCCGTTGGTATCCGTATTCTTCTACTCCACATTTTTgacacacaaacccaaacacacacatttttacacaaatccacccacccccccgcccccctccccctcccccacacacacacacacatccacacatccACTTGGTTTCCAGCTCTCAGTCACCATACCTAGTTCTTATTTCTTAGCCATTAAATTTACAACGCTTCATATATGTCCTGCCACACCTTGTTGAATTGTTGCCTTTTGTTCCGATCTTCGAACATTGATTTTTCTATACTTAAATAGTATTTCATTAGTCCTTTTCATTGTTGTAACGATGGGGCCTCTGTATCCATCCAATGGGGTATTTTAgctgttatagtttttttttgccgTGTACAGTAGTCCCGCGAATTGATAAACAAATAGCTGTGATGAAAAAATTCCGAAGGGAAAATAAACCATCCATCACTGGCACGGAGCCTGGTGTCCTGGTGAACATCCagccaaaaagaagaaaaaaaaatgtttcagcaGGTACCGGGAGGAGTGGGGA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817302.1 True 4298 mRNA 0.47 6 8801253 8817185

Neighbor

gene id symbol gene type direction distance location
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 14587 8776022 ~ 8786666 (-)
si:dkey-23f9.4 NA coding downstream 61965 8732068 ~ 8739288 (-)
gpr179 gpr179,LOC107098834 coding downstream 194480 8575233 ~ 8606773 (-)
npepps npepps,LOC102793525,LOC107098842,LOC108244358 coding downstream 238955 8519935 ~ 8562298 (-)
c1h6orf120 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 coding downstream 284001 8512245 ~ 8517252 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding upstream 1102 8818287 ~ 8857778 (-)
dla LOC103359048,LOC108245305 coding upstream 95197 8912382 ~ 8919144 (-)
LOC120559379 NA coding upstream 126660 8943845 ~ 8954842 (-)
LOC120565400 NA coding upstream 189754 9006939 ~ 9011578 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 348803 9165988 ~ 9246905 (-)
G2961 NA non-coding downstream 524 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 1120 8799491 ~ 8800133 (-)
G2937 NA non-coding downstream 43153 8756366 ~ 8758100 (-)
G2894 NA non-coding downstream 156062 8644195 ~ 8645191 (-)
G2892 NA non-coding downstream 158771 8641303 ~ 8642482 (-)
LOC120558812 NA non-coding upstream 73661 8890846 ~ 8892363 (-)
LOC120559564 NA non-coding upstream 154489 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding upstream 157419 8974604 ~ 8980978 (-)
G3036 NA non-coding upstream 209822 9027007 ~ 9027944 (-)
G3052 NA non-coding upstream 304528 9121713 ~ 9124011 (-)
G2938 LOC107098689,LOC103359055 other downstream 33280 8758649 ~ 8767973 (-)
wipf2a NA other downstream 300091 8435799 ~ 8501162 (-)
G2840 NA other downstream 591718 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 843632 7935940 ~ 7957621 (-)
G2752 NA other downstream 1037305 7739824 ~ 7763948 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 88487 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 691419 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 708076 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 1023405 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 1040895 9858080 ~ 10211304 (-)

Expression


Co-expression Network