LOC120569492


Basic Information

Item Value
gene id LOC120569492
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24133897 ~ 24135669 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817383.1
CAAAAAGTCTAAGATGAAGTCAGATGCGCagcttttttttgtgaatgaaaggggagaaggggGTCTGCTGTTCTGACCCATGCAGGCGGGCGAAGTAGAGCGCCTGTTGGGCCGCCGTGCCACCGGACACTCCGGACCATGACCTTGGACAGCAAGCGCATGGAGGAGACGGATCTTGACGTAGGGGGACAGACGGATGGTAGCGACGATCTGAAGACCACAGGTCTTTCAGTGATAAATACGAGTAATCCCGAGTCTGAGCAAAGCGCTTCATCCTTGGCTCCTGAAGTGCGGGAGGAGGGAGACTTTGCAGCCCGGCTAAAGGATGGTCCAGACAGGAGAACCACCTCGGTGAAGCCTCCTTACTCGTACATCGCTCTCATCACCATGGCCATCCTCCAGAGCCCGAAAAAAAGACTCGCCCTCAGTGAGATATGTGATTTTATCAGCCAGCGCTTTGCGTATTATCGGGAGAAGTTCCCTGCTTGGCAAAACTCAATCCGTCACAACTTGTCTCTAAATGACTGCTTTGTCAAAATGCCCCGGGAGCCTGGGAATCCTGGCAAGGGGAATTACTGGACACTGGATCCCATGTCGGCAGGTATGTTTGAAAACGGGAGTTTTCTTCGGCGGAGGAAACGCTTCAAGAGGCAACATTTCTATTTGGGGGCGTTGAAGGACTGCAGGGCGAAGGAGCGCAGCCTGATGCCCGTGTTTCCTCTCCTCGGAGGGCACAGGATGAGTTCTTGTCTCCAGGCTCCGGAGTTGTACCACGAGCTGGGCTTCAGAAGTCGACTAAGCCCCCACACTATTCCCAGCACCCCACCTGTAAGCAGCATCATACCTgcactctcctctctcctctccaacAATTTCCCCTCATGTCGAACCTTTGAACATTTCGACCCGGGACGCTGCACGGCTGTCCCATCTCTGGCTCCAAACTGCTCGTTCGTGCCTCCTGTCTCGCTGCACGGAATGAACTACCCTGCTTCTCAGCTCTCCCATTTCCCCACTGGGATCCTAAAAGTTTCgtctaatttaatttaatgtagCTTAATGACGCCTTTCTTGAATGGAATCTTCTTATTCTTCGACTGAGAATAAACCCATGGTAGCCTACATTATGTACAAATACAGTTTTTAATGCAAACATGCCTCCATATTTGTTTTTGAATAAGTGATATTTTACAGTTATGTTTGGAATAGAACGTGGTTGAATTCACAGTCTGCAATTTGAATTAAATATCAGAGTTTATCGTCATAGACACAATCAAATAGCGTCGCTTACgattcttttacattttggttgaTTGTATTACATATTTTCTTTCTCCTTGTTTCTACGAAATTAAGACTAAATTGAACTGTAAGATTTGTGCAAAAGTATGTGCACTAGAgtttaaaagaagaagaaataaatcacaaaagtaGGCTATTTATTCCATATTCTTAATATAGCCAAACTCAACGCAaataattaggcctatatacCAACAACAATAATGATAtgctttcaaatattttttgggCAACGTTGGCCGTTAAATTTGTAAAGATCAGAATAAATTACTCTTTTAATAcaaataggcctactgtaataaataaaaaagtaggcTAGTAGCCTATATGTGAAATGCAGTTAGACCTTCTTGGAGCCAATAACAATCCAAATGTGCATGGTAAATGTTCAACCTATCCGATATGGCCTATGGATTTGCACAAACACAGCCTACTTACActctaaaataaatgtaatttgtgcaaatgtga

Function

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817383.1 True 1773 mRNA 0.45 1 24133897 24135669

Neighbor

gene id symbol gene type direction distance location
lyl1 LOC105910150 coding downstream 37674 24091667 ~ 24096223 (-)
LOC120556266 LOC103353763,LOC100700287 coding downstream 65069 24066928 ~ 24068828 (-)
rab11fip4b rab11fip4,LOC102782519 coding downstream 448458 23657337 ~ 23685439 (-)
LOC120555782 NA coding downstream 477641 23650623 ~ 23656256 (-)
suz12b suz12 coding downstream 577647 23543467 ~ 23556250 (-)
zglp1 zglp1 coding upstream 1719 24137388 ~ 24145207 (-)
fdx2 fdx1l,LOC104950501 coding upstream 9733 24145402 ~ 24149825 (-)
cdkn2d cdkn2d,LOC102798019 coding upstream 79024 24214693 ~ 24217245 (-)
ap1m2 ap1m2 coding upstream 81699 24217368 ~ 24223061 (-)
ldlrb LOC106675973,LOC102204666 coding upstream 91751 24227420 ~ 24241325 (-)
LOC120567450 NA non-coding downstream 34804 24096692 ~ 24099093 (-)
G7179 NA non-coding downstream 49621 24082513 ~ 24084276 (-)
LOC120556287 NA non-coding downstream 74053 24056501 ~ 24059844 (-)
G7141 NA non-coding downstream 78137 24015459 ~ 24055760 (-)
LOC120556236 NA non-coding downstream 190324 23937409 ~ 23943573 (-)
G7292 NA non-coding upstream 309511 24445180 ~ 24449314 (-)
G7324 NA non-coding upstream 400711 24536380 ~ 24539504 (-)
G7325 NA non-coding upstream 404295 24539964 ~ 24541406 (-)
G7343 NA non-coding upstream 421809 24557478 ~ 24557697 (-)
G7348 NA non-coding upstream 450357 24586026 ~ 24586319 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 248135 23882745 ~ 23885762 (-)
palm3 NA other downstream 322876 23772856 ~ 23811021 (-)
G7071 NA other downstream 365056 23752026 ~ 23768841 (-)
si:ch211-207j7.2 NA other downstream 387866 23734364 ~ 23746031 (-)
LOC120557242 NA other downstream 413147 23711827 ~ 23720750 (-)
G7323 NA other upstream 396567 24532236 ~ 24535316 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other upstream 529716 24665385 ~ 24669297 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other upstream 620263 24755932 ~ 24759618 (-)
G7589 NA other upstream 1562592 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 1648275 25783944 ~ 25788229 (-)

Expression


Co-expression Network