LOC120545674


Basic Information

Item Value
gene id LOC120545674
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18663944 ~ 18664507 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636725.1
ggggctaaaaatagaaaaagaaagagggaaaaggagatgACATGTCAAGGGATGCGACAGCAGTTAAATaagtggatggtgaaaggcaacaggtgtgaggatggtggaCCAGGAAAGACAGGGGAAGGCAACAGtgGAGAAGAACACAGGCACGGAGTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636725.1 True 162 lncRNA 0.48 3 18663944 18664507

Neighbor

gene id symbol gene type direction distance location
LOC120571862 NA coding downstream 15544 18646159 ~ 18648400 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding downstream 34819 18624108 ~ 18629125 (-)
tecrb tecr,LOC107390378 coding downstream 111110 18539663 ~ 18552834 (-)
b3gntl1 b3gntl1,LOC105924764 coding downstream 851369 17794352 ~ 17812575 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding downstream 874964 17782589 ~ 17788980 (-)
LOC120557593 LOC103362234 coding upstream 10901 18675408 ~ 18702209 (-)
LOC120567401 nxnl1,LOC103362235,LOC101486728 coding upstream 37931 18702438 ~ 18705754 (-)
LOC120567388 LOC100712387,LOC102193985,LOC102310568,LOC101487876 coding upstream 40897 18705404 ~ 18710720 (-)
LOC120563085 colgalt1,LOC102311502,LOC100712117,LOC103362237 coding upstream 48429 18712936 ~ 18726750 (-)
LOC120563090 NA coding upstream 62893 18727400 ~ 18736521 (-)
G5809 NA non-coding downstream 76408 18584673 ~ 18587536 (-)
G5801 NA non-coding downstream 88613 18575017 ~ 18575331 (-)
G5800 NA non-coding downstream 89690 18574050 ~ 18574254 (-)
LOC120559135 NA non-coding downstream 90793 18569244 ~ 18573151 (-)
G5787 NA non-coding downstream 124290 18539322 ~ 18539654 (-)
G5921 LOC103372008 non-coding upstream 171770 18836277 ~ 18857539 (-)
G5926 LOC103372008 non-coding upstream 210368 18874875 ~ 18875738 (-)
G5935 NA non-coding upstream 265749 18930256 ~ 18930500 (-)
G5954 NA non-coding upstream 291900 18956407 ~ 18956631 (-)
G5970 NA non-coding upstream 296705 18961212 ~ 18961997 (-)
LOC120556582 NA other downstream 782185 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 815907 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 828183 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 950046 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 1242846 17412053 ~ 17421098 (-)
G5930 LOC102307335,LOC101466373 other upstream 220461 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 307463 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 358709 19023216 ~ 19037081 (-)
G6084 NA other upstream 825081 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 1100386 19764893 ~ 19765387 (-)

Expression


Co-expression Network