LOC120558530


Basic Information

Item Value
gene id LOC120558530
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13765193 ~ 13767856 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639135.1
TTTAGTTCCTGGCTCCTATTTAGAAGGATTACCACACAATGTTATTGTAATTAGAATTGTTCTACCAATGAGTCTGTTGAAGCTATTCTTGTCCGTTGTTATTTTGCTAATGTAGCGGCTAGTGTTTGCGTATTTGCTCTGCTAGTCACGGTATCACGTTTTACGTGTCCAGGAGACCTTGTTGAGaaagATGTAATTAAGGGAGGTTTATCGCTGGATGGGAGATTTCATgaACGTCTGACTGTGTCGATGTCCCACTTGGTAAACTGAActaccaacccgttctcactcccaactcataAAATACTGGCGCTTgttcagtggctctcagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639135.1 True 333 lncRNA 0.43 3 13765193 13767856

Neighbor

gene id symbol gene type direction distance location
LOC120558275 NA coding downstream 106576 13650750 ~ 13658617 (-)
LOC120558503 NA coding downstream 132877 13630594 ~ 13632316 (-)
LOC120558365 gpr108,LOC107090075 coding downstream 142026 13610299 ~ 13623167 (-)
soul5l LOC104926857,LOC103375185,LOC100694454 coding downstream 157372 13598730 ~ 13607821 (-)
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding downstream 290634 13428440 ~ 13474559 (-)
micall2b LOC103369616,LOC102192527,LOC102076226 coding upstream 19353 13787209 ~ 13805843 (-)
si:ch73-12o23.1 LOC104949822,LOC100695517,LOC102295315,LOC101478649 coding upstream 44402 13812258 ~ 13829038 (-)
LOC120558306 LOC103369617 coding upstream 62094 13829950 ~ 13841635 (-)
LOC120558337 NA coding upstream 74400 13842256 ~ 13850787 (-)
LOC120558291 NA coding upstream 85780 13853636 ~ 13868786 (-)
LOC120558524 NA non-coding downstream 228945 13520001 ~ 13536248 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding downstream 273196 13487920 ~ 13491997 (-)
G4066 NA non-coding downstream 493019 13195046 ~ 13272174 (-)
G4032 NA non-coding downstream 607976 13089192 ~ 13157217 (-)
G4354 NA non-coding upstream 277504 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 287587 14055443 ~ 14056457 (-)
LOC120558581 NA non-coding upstream 299992 14067848 ~ 14071547 (-)
LOC120558586 NA non-coding upstream 310461 14078317 ~ 14078999 (-)
LOC120558606 NA non-coding upstream 338095 14105951 ~ 14108693 (-)
G4168 NA other downstream 197927 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 724913 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 736800 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 899154 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 902592 12862530 ~ 12862601 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 251046 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 944288 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1133290 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1658688 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2577862 16345718 ~ 16347922 (-)

Expression


Co-expression Network