LOC120558721


Basic Information

Item Value
gene id LOC120558721
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16311929 ~ 16315887 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639170.1
TGCCGTGCTGAGATCGCAGCTTCAGGACATAGctacttcacagcacagtggagtagctaacgttagatgctggctatattggcagtcataaaagcctgtgatcatgcggagctctgtacccaaccgACAGACATGCTTTTTCATCTTAGAATTatgTGCTTGGCGTTGTTTCCAGGTCCCAGGGGTTTAAGGCCCAGACAGGTGACACAACCTCAACTGAGTGCTTTGCCTGGTCCAACAATGTATGAAAGccaaaagagagagggaggtggtGTCTGCCATTCGTGGGGAGTGAGAGGTCATCTGGAATATTCTCCGTGAGCACGATGCTCCCGTCCCACTCTGATGTCTTCACTCTATGCCGCCGTCTTCATCCTGCTGGTTCCTCACTGTCCTGGAAG

Function

GO:

id name namespace
GO:0051276 chromosome organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639170.1 True 401 lncRNA 0.51 3 16311929 16315887

Neighbor

gene id symbol gene type direction distance location
LOC120567135 LOC102194342,LOC101467413,LOC103358059,LOC102294944,LOC100712572 coding downstream 28243 16246404 ~ 16283686 (-)
sec23b LOC100697981,LOC102779165,LOC101466658 coding downstream 233586 16064549 ~ 16078343 (-)
LOC120561637 gsg1l,LOC104954731,LOC103358062 coding downstream 253576 16050764 ~ 16058353 (-)
nomo LOC446065,LOC107089097,LOC105931477,LOC102292868,LOC102196167 coding downstream 277314 15994372 ~ 16034615 (-)
LOC120561525 xylt1,LOC102778305 coding downstream 412528 15816338 ~ 15899401 (-)
wfikkn1 wfikkn1 coding upstream 36754 16352641 ~ 16356941 (-)
LOC120558696 rab40c,LOC103358055,LOC100700672,LOC101469960,LOC107089104 coding upstream 41176 16357063 ~ 16362428 (-)
LOC120558661 NA coding upstream 49378 16365265 ~ 16381421 (-)
pdcd11 NA coding upstream 67899 16383786 ~ 16402403 (-)
taf5 taf5 coding upstream 88023 16403910 ~ 16410013 (-)
G4915 NA non-coding downstream 54358 16195274 ~ 16257571 (-)
G4886 NA non-coding downstream 262300 16049388 ~ 16049629 (-)
G4881 NA non-coding downstream 263049 16047844 ~ 16048880 (-)
G4860 NA non-coding downstream 317844 15993604 ~ 15994085 (-)
G4815 NA non-coding downstream 530176 15781397 ~ 15781753 (-)
G5068 NA non-coding upstream 9128 16325015 ~ 16325323 (-)
G5069 NA non-coding upstream 9634 16325521 ~ 16325846 (-)
G5081 NA non-coding upstream 32379 16348266 ~ 16349983 (-)
G5079 mettl26 non-coding upstream 34180 16350067 ~ 16352468 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding upstream 333158 16649045 ~ 16651526 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 626290 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 1407700 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 1592827 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2269419 14018902 ~ 14042510 (-)
G4168 NA other downstream 2744663 13531753 ~ 13567266 (-)
LOC120558720 NA other upstream 29831 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 1096166 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 1394752 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 1501620 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 1520017 17835904 ~ 17848037 (-)

Expression


Co-expression Network