LOC120558812


Basic Information

Item Value
gene id LOC120558812
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8890846 ~ 8892363 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639204.1
CCAAGTCACACGGCTGTGGATGAAGGCGACAACTAAGAAGCTGCTAATAACCAGCAATTAAGTCGCGTGCATCATCTGGAACACCTGTTTCGGACAAATGACAGCACGTGCCGTGCGCGAGTCCAGTAGCTCCTCGGGTCAGTTTATTTGGCTATTCTGCTCAGCGGGTGGCCGGTAACGCAACACCAAAGATAATTTTAGCTGTTAGTGATGCTAAAAAGACGAACCATCAGTGAGTTTCAGGCAGATGGATGCAGCAAGAACCCCCCAGTATAACGCACCCAACCTGCCCTGTTCCGGGTGGATAAACTTCGGTGACAGTGGCAGCAGGTCTGGTGAGCTCCGCACAGCGAGATCCAGGGTCAGCTTGTACTTTCAAGGACAATCACTTGAAGTG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639204.1 True 397 lncRNA 0.51 3 8890846 8892363

Neighbor

gene id symbol gene type direction distance location
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding downstream 33068 8818287 ~ 8857778 (-)
LOC120569430 NA coding downstream 73661 8801253 ~ 8817185 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 104180 8776022 ~ 8786666 (-)
si:dkey-23f9.4 NA coding downstream 151558 8732068 ~ 8739288 (-)
gpr179 gpr179,LOC107098834 coding downstream 284073 8575233 ~ 8606773 (-)
dla LOC103359048,LOC108245305 coding upstream 20019 8912382 ~ 8919144 (-)
LOC120559379 NA coding upstream 51482 8943845 ~ 8954842 (-)
LOC120565400 NA coding upstream 114576 9006939 ~ 9011578 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 273625 9165988 ~ 9246905 (-)
hoga1 hoga1,LOC102797601 coding upstream 412584 9304947 ~ 9331554 (-)
G2961 NA non-coding downstream 90117 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 90713 8799491 ~ 8800133 (-)
G2937 NA non-coding downstream 132746 8756366 ~ 8758100 (-)
G2894 NA non-coding downstream 245655 8644195 ~ 8645191 (-)
G2892 NA non-coding downstream 248364 8641303 ~ 8642482 (-)
LOC120559564 NA non-coding upstream 79311 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding upstream 82241 8974604 ~ 8980978 (-)
G3036 NA non-coding upstream 134644 9027007 ~ 9027944 (-)
G3052 NA non-coding upstream 229350 9121713 ~ 9124011 (-)
G3053 NA non-coding upstream 233820 9126183 ~ 9126700 (-)
G2938 LOC107098689,LOC103359055 other downstream 122873 8758649 ~ 8767973 (-)
wipf2a NA other downstream 389684 8435799 ~ 8501162 (-)
G2840 NA other downstream 681311 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 933225 7935940 ~ 7957621 (-)
G2752 NA other downstream 1126898 7739824 ~ 7763948 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 13309 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 616241 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 632898 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 948227 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 965717 9858080 ~ 10211304 (-)

Expression


Co-expression Network