LOC120559581


Basic Information

Item Value
gene id LOC120559581
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8974604 ~ 8980978 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639324.1
aGTTGGACTCAATTCAGGAAGAAGAAAACTCTGAGCTCCACCACTAAACCACATGAGCCTGTAGAACtagagTTAGACTCTTGTCCTGATTATGAGAACATCTCAGACACTGCAGCAAAGACAGAATACCCAGAGGAGCAGGAAGACCTGTCAGACTCTTGTCCTGTGTATGGGAACATCTGAGAAGATGAGATATGAGAAATATCCCTGTGGAGAGCGAGGCTGTGGAGGGTGCGGGGGATCTGGAAACATTTACCTTCAACTCCAGAAGATTTTATTGTCAGTTttcagtagcagcagcagataGGAGTCAGCAGCAGCATGTAGCAGAACGTTTAGAAGAATGTGGTGTTGGCAGCTTGAACTGAATCATGTCGAGACGTCAAACATAATTTTTTGTTTAGATCATCTGATGGTCAGGTGCTGTGTGACTTACTAATGTATATGCAagcttattttttttcctgtagAGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639324.1 True 476 lncRNA 0.43 3 8974604 8980978

Neighbor

gene id symbol gene type direction distance location
LOC120559379 NA coding downstream 19762 8943845 ~ 8954842 (-)
dla LOC103359048,LOC108245305 coding downstream 55460 8912382 ~ 8919144 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding downstream 116826 8818287 ~ 8857778 (-)
LOC120569430 NA coding downstream 157419 8801253 ~ 8817185 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 187938 8776022 ~ 8786666 (-)
LOC120565400 NA coding upstream 25961 9006939 ~ 9011578 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 185010 9165988 ~ 9246905 (-)
hoga1 hoga1,LOC102797601 coding upstream 323969 9304947 ~ 9331554 (-)
LOC120559457 LOC103383201,LOC105931257 coding upstream 415852 9396830 ~ 9412357 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding upstream 496702 9477680 ~ 9489740 (-)
LOC120558812 NA non-coding downstream 82241 8890846 ~ 8892363 (-)
G2961 NA non-coding downstream 173875 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 174471 8799491 ~ 8800133 (-)
G2937 NA non-coding downstream 216504 8756366 ~ 8758100 (-)
G2894 NA non-coding downstream 329413 8644195 ~ 8645191 (-)
G3036 NA non-coding upstream 46029 9027007 ~ 9027944 (-)
G3052 NA non-coding upstream 140735 9121713 ~ 9124011 (-)
G3053 NA non-coding upstream 145205 9126183 ~ 9126700 (-)
G3048 NA non-coding upstream 172272 9153250 ~ 9153699 (-)
G3049 NA non-coding upstream 174961 9155939 ~ 9160172 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 66518 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 206631 8758649 ~ 8767973 (-)
wipf2a NA other downstream 473442 8435799 ~ 8501162 (-)
G2840 NA other downstream 765069 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 1016983 7935940 ~ 7957621 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 527626 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 544283 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 859612 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 877102 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1918580 10899558 ~ 10905235 (-)

Expression


Co-expression Network