LOC120559965


Basic Information

Item Value
gene id LOC120559965
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 26189900 ~ 26190303 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639395.1
ctgggacaatgtggctgtgttagttgatgaaacacttataccacaagagctGTGTAGCCCGATCCTACAGACCCCAACACAccagaacataaaacaaaaggtccttctaataaggaataagaacgttggaaacagACAATCCGTTCCTGAACAAAGGATCCGTAAGGGTGATGGCTACTCGATAGCACATAGGGCTGAAATCAACCATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639395.1 True 211 lncRNA 0.44 3 26189900 26190303

Neighbor

gene id symbol gene type direction distance location
polr1e polr1e coding downstream 155478 26029630 ~ 26034422 (-)
LOC120560668 LOC103354873 coding downstream 180675 26007901 ~ 26009225 (-)
LOC120560669 LOC103354873 coding downstream 186629 26001504 ~ 26003271 (-)
camk2d2 camk2d,LOC100698346,LOC102204310,LOC106958643,LOC103469495,LOC103354871,LOC108246882,LOC107382167,LOC106904815,LOC101466566,LOC103383722,LOC102794776 coding downstream 189874 25961727 ~ 26000026 (-)
ppp2r2ca LOC103383728,LOC103353185,LOC100709897,LOC104957013,LOC101464647 coding downstream 360667 25821054 ~ 25829233 (-)
trnap-agg NA coding upstream 221989 26412292 ~ 26412363 (-)
LOC120557121 NA coding upstream 234788 26425091 ~ 26435787 (-)
rfc1 rfc1 coding upstream 329175 26519478 ~ 26533118 (-)
rpl9 rpl9 coding upstream 349001 26539304 ~ 26546556 (-)
ugdh ugdh coding upstream 363731 26554034 ~ 26559727 (-)
LOC120559960 NA non-coding downstream 14 26188761 ~ 26189886 (-)
G7765 NA non-coding downstream 53062 26135900 ~ 26136838 (-)
G7730 NA non-coding downstream 79835 26021208 ~ 26110065 (-)
G7737 LOC103354866 non-coding downstream 150793 26038291 ~ 26039107 (-)
G7726 NA non-coding downstream 171800 26016460 ~ 26018100 (-)
G7871 NA non-coding upstream 55038 26245341 ~ 26301677 (-)
G7883 NA non-coding upstream 117560 26307863 ~ 26411307 (-)
G7917 NA non-coding upstream 258304 26448607 ~ 26448986 (-)
G7918 NA non-coding upstream 265274 26455577 ~ 26455783 (-)
G7921 NA non-coding upstream 302599 26492902 ~ 26495765 (-)
adamtsl7 NA other downstream 68251 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 95656 26075397 ~ 26094244 (-)
G7722 LOC103354873 other downstream 180683 26001524 ~ 26009217 (-)
G7603 LOC103353181 other downstream 401671 25783944 ~ 25788229 (-)
G7589 NA other downstream 490343 25698261 ~ 25699557 (-)
LOC120566984 NA other upstream 343530 26533833 ~ 26535736 (-)
smim14 smim14 other upstream 376764 26567067 ~ 26578815 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other upstream 1091495 27281798 ~ 27294911 (-)
rnf24 rnf24,LOC102778784 other upstream 3115718 29306021 ~ 29339847 (-)
G8701 NA other upstream 3399005 29589308 ~ 29593623 (-)

Expression


Co-expression Network