LOC120560178


Basic Information

Item Value
gene id LOC120560178
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17738072 ~ 17739847 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639433.1
TATCAATGTGGTTCCTATCTTCACTATGGTGGAGGCAACATCTATCCCTGGAAAAGAGATCAAAGGAGATGGAGGCAACATGAACAGAAACAAAACCaagacagcagaaacagaggAAGTGATAAGTGTATCAGATATTTATCAAAATCAAGACTTAGTGTACTCAAAGCAGCGGACCTCCGAACCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639433.1 True 189 lncRNA 0.41 3 17738072 17739847

Neighbor

gene id symbol gene type direction distance location
LOC120562183 tekt4 coding downstream 56288 17677670 ~ 17681784 (-)
LOC120569316 LOC104945333,LOC102299380,LOC102207980,LOC101475478 coding downstream 61870 17657147 ~ 17676202 (-)
crtac1a LOC104945331,LOC103368018 coding downstream 90250 17641306 ~ 17647822 (-)
avpi1 NA coding downstream 120991 17614153 ~ 17617081 (-)
pgam1b pgam1,pgm,LOC104945324,LOC104927840 coding downstream 131770 17602906 ~ 17606302 (-)
LOC120556506 NA coding upstream 17822 17757669 ~ 17763809 (-)
LOC120560200 NA coding upstream 27076 17766923 ~ 17768175 (-)
LOC120560193 NA coding upstream 33437 17773284 ~ 17779277 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding upstream 42742 17782589 ~ 17788980 (-)
b3gntl1 b3gntl1,LOC105924764 coding upstream 54505 17794352 ~ 17812575 (-)
G5608 NA non-coding downstream 3321 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 37683 17699260 ~ 17700389 (-)
G5522 NA non-coding downstream 92407 17617187 ~ 17645665 (-)
G5506 NA non-coding downstream 124864 17557841 ~ 17613208 (-)
G5449 NA non-coding downstream 290038 17399905 ~ 17448034 (-)
G5616 NA non-coding upstream 41933 17781780 ~ 17782013 (-)
G5638 NA non-coding upstream 112817 17852664 ~ 17852981 (-)
G5666 NA non-coding upstream 227480 17967327 ~ 17968130 (-)
G5679 NA non-coding upstream 261578 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 265388 18005235 ~ 18008724 (-)
LOC120560175 NA other downstream 24174 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 316974 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1390150 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 2052433 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2833843 14901146 ~ 14904229 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 77660 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 96057 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 140021 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1145121 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1232123 18971970 ~ 18982318 (-)

Expression


Co-expression Network