LOC120562378


Basic Information

Item Value
gene id LOC120562378
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 28803978 ~ 28804821 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639769.1
TTCAGAGCAACACTACAACAACCTCCTCGACCGTCTGCGAGACAATCTGCTGAAATTGTAAAGACTTGAAGGTGTGATCACTGTAACCATGCTGAAGATAGTATTTGTGCTTGGATGCCTTCTGAGCTTCGCTCTGGCTCATCCTACGGATATGGAGCACAAACGACTTGCTCGTTCACGCTCTGGCTCACATTCCAATGAGCGTATATACTGGCCAGGTATGGTGAATAATCCATCTGTAGCGACTGTCCCACAGTGGTTCCAGGCCATACTTGCCCTCCTCCAACAAACTACTACTGCAGCacctgctactactactactactacaaagTAAAATCTGGAATTTTGCTAGAGATCAATAGTGAATGAATTTTGACatcagttttgttttgtgtcagcTTTTCAGAACaactgtttctttctcttttcaaaTTGAAATGATGTTGTCTTATAGTAAGTTCAGTTAAACATGTGGGTCAAAATCACTTTATTCTCTGTAGTAGCTGACAATAAACTTCATGGAAATCATGGACCAaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639769.1 True 537 lncRNA 0.41 4 28803978 28804821

Neighbor

gene id symbol gene type direction distance location
LOC120562360 NA coding downstream 11656 28790069 ~ 28792322 (-)
scpp7 LOC103369818 coding downstream 14905 28786602 ~ 28789073 (-)
scpp5 NA coding downstream 18131 28783601 ~ 28785847 (-)
enam LOC103369798 coding downstream 28028 28772912 ~ 28775950 (-)
cnga1a LOC103369883,LOC107099492 coding downstream 31952 28766688 ~ 28772026 (-)
zgc:111983 NA coding upstream 7802 28812623 ~ 28813564 (-)
odam NA coding upstream 12062 28816883 ~ 28819501 (-)
scpp9 NA coding upstream 18336 28823157 ~ 28825677 (-)
sparcl1 sparcl1 coding upstream 23505 28828326 ~ 28835621 (-)
aptx aptx coding upstream 37726 28842547 ~ 28845199 (-)
G8371 NA non-coding downstream 4109 28743751 ~ 28799869 (-)
LOC120562373 NA non-coding downstream 7841 28795582 ~ 28796137 (-)
G8335 NA non-coding downstream 152994 28650663 ~ 28650984 (-)
LOC120564808 LOC107663761,LOC107746645,LOC107750038,LOC107712283,LOC107662224 non-coding downstream 175003 28627706 ~ 28628975 (-)
G8333 NA non-coding downstream 186554 28617190 ~ 28617424 (-)
G8385 NA non-coding upstream 2124 28806945 ~ 28807448 (-)
LOC120562398 NA non-coding upstream 4604 28809425 ~ 28812219 (-)
G8417 NA non-coding upstream 15483 28820304 ~ 28859071 (-)
G8438 NA non-coding upstream 110746 28915567 ~ 28915819 (-)
G8486 NA non-coding upstream 207604 29012425 ~ 29016986 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 1509067 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 2225163 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 2268242 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 2682329 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 2709734 26075397 ~ 26094244 (-)
rnf24 rnf24,LOC102778784 other upstream 501200 29306021 ~ 29339847 (-)
G8701 NA other upstream 784487 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 1771051 30575872 ~ 30744878 (-)
G8975 NA other upstream 2166567 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 3129816 31934637 ~ 32006542 (-)

Expression


Co-expression Network