LOC120566883



Basic Information


Item Value
gene id LOC120566883
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 515579 ~ 518042 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005640480.1
TCATCGTCAGGCTAGCTTAACCTGGACCGGTTCGGATTGAATTTGGGGGTAACAGCTCAAACGAGATTTGGAAGAACATGACCTGAAAGTCTCCTTCAACGAACTATGACAAATAAAATGATGGCCATAATGAGCCTCAGAGGAAGAAGTGGGAAGGTTGCCTTCATGAAGACTCATCTCTACAAGATAATCTGTGACGCTGTCTTGAGCTCATATGATAAAACTACAACAAAAGTAGACAAATACATGGCCAAATACTTGATATATGCACCAGAGAGGCCGGTGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005640480.1 True 286 lncRNA 0.43 4 515579 518042

Neighbor


gene id symbol gene type direction distance location
tbce NA coding downstream 85595 404857 ~ 429984 (-)
LOC120560351 NA coding downstream 185546 319682 ~ 330033 (-)
LOC120560232 LOC103372506 coding downstream 208949 277480 ~ 306630 (-)
LOC120560139 gtdc1 coding downstream 245041 254800 ~ 270538 (-)
LOC120564633 NA coding downstream 406587 108587 ~ 108992 (-)
LOC120566769 NA coding upstream 54722 572764 ~ 577992 (-)
tomm20b tomm20,LOC103375291,LOC103383373,LOC100703030,LOC108247505 coding upstream 933957 1451999 ~ 1458867 (-)
LOC120560873 LOC104946033 coding upstream 1107488 1625530 ~ 1629159 (-)
LOC120566021 NA coding upstream 1579327 2097369 ~ 2106501 (-)
LOC120566031 NA coding upstream 1610531 2128573 ~ 2135521 (-)
G411 NA non-coding downstream 78276 436010 ~ 437303 (-)
G142 NA non-coding downstream 113612 401307 ~ 401967 (-)
G131 NA non-coding downstream 146385 368979 ~ 369194 (-)
G68 NA non-coding downstream 198446 315707 ~ 317133 (-)
G81 NA non-coding downstream 220733 294523 ~ 294846 (-)
G473 NA non-coding upstream 4568 522610 ~ 523002 (-)
G483 NA non-coding upstream 36668 554710 ~ 555100 (-)
G491 NA non-coding upstream 114013 632055 ~ 721794 (-)
G497 NA non-coding upstream 243193 761235 ~ 762243 (-)
LOC120566899 NA non-coding upstream 368845 886887 ~ 887829 (-)
G413 NA other downstream 76131 438657 ~ 439448 (-)
LOC120574930 LOC103372508,LOC108249786,LOC103470876,LOC102234899 other downstream 268606 233044 ~ 246973 (-)
G65 NA other downstream 283646 227526 ~ 231933 (-)
LOC120567035 NA other downstream 358341 154328 ~ 157238 (-)
G63 NA other downstream 361353 151749 ~ 154226 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other upstream 367307 885349 ~ 886343 (-)
G519 NA other upstream 448194 966236 ~ 974827 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other upstream 841622 1359664 ~ 1360473 (-)
stab2 NA other upstream 952375 1470417 ~ 1576495 (-)
LOC120566421 NA other upstream 1215504 1733546 ~ 1749692 (-)

Expression



Co-expression Network