LOC120566926


Basic Information

Item Value
gene id LOC120566926
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 891621 ~ 892123 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640492.1
caaggTGCTGAATGCCAGTGTCATCCCGAGGGCCAGTTCATTGACAACAAGAGGCTTCAGAGAAGCTGCTTGGGTCAATTGATATTCCACTATGGCAGTACAAATTCGGACACACAAAGGTGTTCTTCAAGGCGGTCTGCTGGGTGTCCTTGAGGAGATGAGAGATGAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640492.1 True 173 lncRNA 0.49 2 891621 892123

Neighbor

gene id symbol gene type direction distance location
LOC120566870 NA coding upstream 33088 840662 ~ 858533 (+)
LOC120566667 NA coding upstream 84578 632750 ~ 807043 (+)
LOC120566718 NA coding upstream 99716 788102 ~ 791905 (+)
LOC120566682 NA coding upstream 117896 756425 ~ 773725 (+)
LOC120566650 NA coding upstream 173950 712986 ~ 717671 (+)
LOC120566581 NA coding downstream 81682 973805 ~ 984586 (+)
LOC120566725 NA coding downstream 174575 1066698 ~ 1072641 (+)
LOC120566475 NA coding downstream 200896 1093019 ~ 1103529 (+)
LOC120566383 NA coding downstream 245955 1138078 ~ 1171265 (+)
LOC120566742 NA coding downstream 256883 1149006 ~ 1150498 (+)
G270 LOC103372508 non-coding upstream 79674 808561 ~ 811947 (+)
G261 NA non-coding upstream 199392 686445 ~ 692229 (+)
G221 NA non-coding upstream 368632 522532 ~ 522989 (+)
G55 NA non-coding upstream 481159 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 504973 370651 ~ 386648 (+)
G281 NA non-coding downstream 75207 967330 ~ 968520 (+)
LOC120566887 NA non-coding downstream 410590 1302713 ~ 1303535 (+)
G309 NA non-coding downstream 459397 1351520 ~ 1352050 (+)
G310 NA non-coding downstream 462013 1354136 ~ 1354378 (+)
G321 LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945 non-coding downstream 491007 1383130 ~ 1383452 (+)
LOC120566394 NA other upstream 137859 708153 ~ 753762 (+)
G176 LOC104946033 other upstream 293414 583390 ~ 598207 (+)
G184 NA other upstream 409731 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 570842 291233 ~ 320779 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 667025 200413 ~ 224596 (+)
LOC120566368 NA other downstream 15717 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 34183 926306 ~ 1011615 (+)
G199 NA other downstream 124784 1016907 ~ 1019038 (+)
G292 NA other downstream 224501 1116624 ~ 1144413 (+)
G165 NA other downstream 252531 1144654 ~ 1158559 (+)

Expression


Co-expression Network