LOC120568012


Basic Information

Item Value
gene id LOC120568012
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16917074 ~ 16920726 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640647.1
GTTTGACTTTAAGTGGTATTTCCCATTGGCTACATCCTTGGGTTTTATTCAGAATAGATGCAAGTAACATCTGCATGTTTTTCACTTCaccttttcacattttaatagcAAAGTTCTTGTTGTATATTTTGAGGCTGGAGGCAATTCCAGGTGCAACTCCCAATGCCAATACACTTGTTTGCAGAGTAAAGTTGAAGCTCAAACGGAATATGTTAGAGACCGTTTCCCCTGCAGGGAGATCACGAACTAAAACTTTATGTGTTGCTCCTCCAAAAGGCCTCAGGCAATAGCAGAGCCGCACTGTAACAAGATTCCGTAGTTTTCACAGCATTATTGCTGTATACTGAACAAATGCCTACTGCATatctgtatacagtatgttgctGTAGATTTTTACGCGATCATGGCCAAAATGCTGTAGAATACGAGACTACAGTAAATACAATTATCCTGTGAATCATATTACAGTAATTTTGAGCGGGATCTATCTGACTTCCACGCCAAGCCACGCAGCCGGAAAGTTCTCCAGAGATTGCAGCAGAGAATATGTTGAAGCACAGATTTCCCTGCCTAGCACTCCCAGGCTAATCATGCTTGGAGGCAGTCACGTCCCTTGAATTTGTCCAACGATAAACCCAGAACAGAGTAAATGTGCTGCTATATTCCAGACCAGCAAGAGCACAGTAAAGAAGGTTCAATGGAAAAAGCTGTCCCTGAATCAACATGTCGCCGCTCTAATCCAGGACTTCATTGAATATTACTGGCAGAATACCTAGAGCATGCCAGTAAAGAAGACGTCCactccactcacacacacattgataGATGCTGGGGTGGAGTTCTTGTTCTTGTGGTAGGACTTCACTACAACATATGtgcacattctctctctctctctctctattctctctctctctctctatgtctctttctctctctctatgtctctatctctctctctctatgtctctttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640647.1 True 976 lncRNA 0.43 4 16917074 16920726

Neighbor

gene id symbol gene type direction distance location
cant1b LOC104922273,LOC104950180 coding downstream 12406 16895705 ~ 16904668 (-)
ldb1b ldb1,LOC104963201,LOC108444470,LOC104922276,LOC103353370,LOC103150493,LOC100706951,LOC108270891,LOC101479469,LOC107090769,LOC106518772 coding downstream 43584 16843787 ~ 16873490 (-)
armh3 lg6h10orf76,cunh10orf76 coding downstream 77352 16815833 ~ 16839722 (-)
LOC120567461 LOC104963199,LOC100697187,LOC102310533,LOC101478713,LOC102778966 coding downstream 107748 16795409 ~ 16809326 (-)
hap1 LOC100707478,LOC101477593,LOC102309093,LOC102207703 coding downstream 165671 16726000 ~ 16751403 (-)
syngr2b syngr2,LOC107090770 coding upstream 16075 16936801 ~ 16945862 (-)
LOC120556225 NA coding upstream 26140 16946866 ~ 16957332 (-)
tmc8 LOC103356194 coding upstream 36886 16957612 ~ 16966225 (-)
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding upstream 64668 16985394 ~ 16995641 (-)
npb npb coding upstream 232196 17152922 ~ 17154504 (-)
G5140 LOC103362533 non-coding downstream 74071 16762368 ~ 16843003 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 265548 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 564606 16350067 ~ 16352468 (-)
G5081 NA non-coding downstream 567091 16348266 ~ 16349983 (-)
G5069 NA non-coding downstream 591228 16325521 ~ 16325846 (-)
G5202 NA non-coding upstream 47183 16967909 ~ 16972243 (-)
G5242 NA non-coding upstream 130902 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 139435 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 141184 17061910 ~ 17062119 (-)
G5265 NA non-coding upstream 142342 17063068 ~ 17065526 (-)
LOC120558720 NA other downstream 569152 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1231435 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2012845 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2197972 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2874564 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 491327 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 789913 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 896781 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 915178 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 959142 17879868 ~ 17881759 (-)

Expression


Co-expression Network