LOC120568390


Basic Information

Item Value
gene id LOC120568390
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4580344 ~ 4582973 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640713.1
gggtttagcgacgTGAGCCTGTTTTAACAGTGAATTGTTAAGTGTCTTAACCCTTCAGAAGgtgtttctcaatgtcaaggaaggatccttcGAAGCCAGAATTTGGAGGATACTACGTCATCGCCGTCCGTCGAAGGACCGTTCCAATGTCGAGGATCCTCCGATTTCTACCAAGGACTGaccccactaacacagaacgtttagggaacgttggggaacgttagtttttggttctctaaaggttagttcgaaccaaaccaaaaactaacgtttagggaacgttccctcatggttataacgttccctaaacgttaggggaaccaacCAACGGGAACGTTTGgtagtttttggttgtttttggttgttcagagtgcggttttgaaatgtttatttaaaccagctccatttacgtttttgaagtagcatataaaaggtttgcagtcacttgatttagattcactcaaaaatgattggtcttataaaatctaagtaagataaacaacatagcaagaTAATAAATTTACTTTTAGGCTGAAATCAATTTTGCTAAAAACTGtacttttgtgcttgatttcgttgttttaactgtattaggtgaaaatacttaaaacaagaatctATCGATTTTCACAACTAAGACAATTCACTTCTTCCATTTCACTTCTAACAAGTGGCTCAATCAGTTCAGTGTTTAAATCCAACCGTTACACCCCCCCGCCAGTAGGGGAAGACCgtgcctctgctctcaggtgaccGATTCAAGTCCTGTCCTCCGGACTTCCGTTTGCGTTTGATACGCTACACCAACggacaaagaaagaagattTTATTTGCTTCGCCAAACGATCTCACGAAAAAatgacTCCAGTCCACAAGCAAGAAAGCATTCCAGGACGGAGCGTGTGTCTAGAAGCCCTGTCTGTCCGTAGACATCACTGCCACCACCACCTGcatATGAGTCAACACCACACAGGAAACCAGGCGGTGGCCCAGAGCTGGATGGGTGTATTCTAACGCGAGCTCGGCCTGCCACTTCATCTTGGGACCCAGTTGAAGCAACTTTTCCTGACAAGCCCGGAGGTTCGACCGGAGGTACTGCCATGCGTCGCATGCTACGGCGAGTCGCAACCAATGATGTTCTAAAACTGTATATCCTGCggggcagaaagagaaagaaggccttccaggacctgactat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640713.1 True 1198 lncRNA 0.44 5 4580344 4582973

Neighbor

gene id symbol gene type direction distance location
LOC120568276 LOC103369331,LOC103383363,LOC101482017,LOC102297858 coding downstream 85066 4456282 ~ 4495278 (-)
ttbk1a ttbk1 coding downstream 171978 4350194 ~ 4408366 (-)
LOC120568341 LOC108251661,LOC106676713 coding downstream 235527 4340201 ~ 4344817 (-)
LOC120568355 LOC103356192,LOC104948400,LOC105918398 coding downstream 339690 4233883 ~ 4240654 (-)
LOC120562966 NA coding downstream 502357 4039169 ~ 4077987 (-)
LOC120563501 NA coding upstream 47080 4630053 ~ 4659684 (-)
LOC120563510 NA coding upstream 88608 4671581 ~ 4690672 (-)
LOC120563484 NA coding upstream 112187 4695160 ~ 4761457 (-)
LOC120563637 NA coding upstream 119066 4702039 ~ 4707509 (-)
LOC120563156 NA coding upstream 202392 4785365 ~ 4793043 (-)
LOC120568393 NA non-coding downstream 36507 4540233 ~ 4543837 (-)
G1514 NA non-coding downstream 60266 4515384 ~ 4520078 (-)
G1507 NA non-coding downstream 87176 4492847 ~ 4493168 (-)
G1505 NA non-coding downstream 114728 4465411 ~ 4465616 (-)
G1477 NA non-coding downstream 129448 4420168 ~ 4450896 (-)
G1622 NA non-coding upstream 151941 4734914 ~ 4791370 (-)
G1657 NA non-coding upstream 164622 4747595 ~ 4749363 (-)
G1666 LOC103369328 non-coding upstream 216903 4799876 ~ 4801970 (-)
G1675 NA non-coding upstream 224931 4807904 ~ 4815646 (-)
G1664 NA non-coding upstream 238753 4821726 ~ 4826182 (-)
G1464 NA other downstream 234258 4345547 ~ 4346086 (-)
G1242 NA other downstream 907806 3648688 ~ 3672538 (-)
dpy30 NA other downstream 915955 3659840 ~ 3664389 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other downstream 931871 3494887 ~ 3648473 (-)
G1623 NA other upstream 58613 4641586 ~ 4788577 (-)
LOC120563598 NA other upstream 191844 4774817 ~ 4783916 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other upstream 493633 5076606 ~ 5085518 (-)
G1726 NA other upstream 514396 5097369 ~ 5097634 (-)
LOC120564103 NA other upstream 531047 5114020 ~ 5135305 (-)

Expression


Co-expression Network