LOC120568393


Basic Information

Item Value
gene id LOC120568393
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4540233 ~ 4543837 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640714.1
CTTCGTTGTCCGCCAAAACACAAGAAGACGACGATGGAGTTCAGGTTAAATGGAGACAGGAGCAGCTAAATCATCTTAAAGCCCCAATgcaacaactttaaatttgacAGAGTGCCCTCTCAAGCAGCCACAACAGCAAGCTGTGTCACAAGCAAAGCTGGCAAttcagCCTCCACCGGAAAAGTTCTCCTGCTACAGCATTTGATTTGAATGGCTAATGTAAGAATATCAGCAGAGAGGAAGCTCAAAAGGACCAGGCTGAGCAAGTCCTAAGGATCTGTGTCTTCCACACAAGTGAAGAAGATGAAGTTGCATCCGAAACTGATGTCGATTGTTATTGAAGGGCATGAGGTACTTGACAACTGTGGAAGTGTTGCAAAAGACTGTCTCCTGCTCGTAGGCATCATTTATGCCATGAACTTGAAAAACGAAGTACACTTTTGAAAATTTTAAAAGCTAAACAAAACTTATAACTTGAATGCACATGTTTGACCCATGAGTTGTCATTTCAAAGAGGGcgctaaaagaaaaatatggCACAGTTGTTTATGTGGCTATTTgtctattttcttatttttctctcGTTTTAATgatgtagtttttattttaacttgttGCACTGTATTAAACATGTGGCCATGTAGAGTGGCTAAGTTGTggggacaaaagaaaagaagttaGATCAGCATTTTCAAGTCAAACCAGAGGTTCTCAACTGGTGGGTCGTGGGGCCATTTTCAATGGGTCACAGATGTGAGTGTGGGCATGTAAAGTGCAAGGGGCAAAATATCCCACTTTTTATTGTTAAGATGCTCTGCTTTTTGTAGGATATTACTCATGATACATGTTTAGAACCTCAGGGCAAAACACTGTTCTTTAAGATGCAATGTTTAAAGATGAAACCAATAATAAGCATGTCTTTTAAGATGCACTGAAGGTTCCTGAAGcatgtcaatattttttttagagAGTTTAAGGTTAAAAAGCCTATCCAAAAGATAGGTTACCGTACGTACTGTACGGTACGTActgttgggcatcgagaaccgattcctaatcggaatcgtttcaaaaattacgattccatcagaatcgtttctttat

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640714.1 True 1104 lncRNA 0.39 4 4540233 4543837

Neighbor

gene id symbol gene type direction distance location
LOC120568276 LOC103369331,LOC103383363,LOC101482017,LOC102297858 coding downstream 44955 4456282 ~ 4495278 (-)
ttbk1a ttbk1 coding downstream 131867 4350194 ~ 4408366 (-)
LOC120568341 LOC108251661,LOC106676713 coding downstream 195416 4340201 ~ 4344817 (-)
LOC120568355 LOC103356192,LOC104948400,LOC105918398 coding downstream 299579 4233883 ~ 4240654 (-)
LOC120562966 NA coding downstream 462246 4039169 ~ 4077987 (-)
LOC120568286 NA coding upstream 59 4543896 ~ 4617183 (-)
LOC120563501 NA coding upstream 86216 4630053 ~ 4659684 (-)
LOC120563510 NA coding upstream 127744 4671581 ~ 4690672 (-)
LOC120563484 NA coding upstream 151323 4695160 ~ 4761457 (-)
LOC120563637 NA coding upstream 158202 4702039 ~ 4707509 (-)
G1514 NA non-coding downstream 20155 4515384 ~ 4520078 (-)
G1507 NA non-coding downstream 47065 4492847 ~ 4493168 (-)
G1505 NA non-coding downstream 74617 4465411 ~ 4465616 (-)
G1477 NA non-coding downstream 89337 4420168 ~ 4450896 (-)
G1478 NA non-coding downstream 115989 4420469 ~ 4424244 (-)
LOC120568390 NA non-coding upstream 36507 4580344 ~ 4582973 (-)
G1622 NA non-coding upstream 191077 4734914 ~ 4791370 (-)
G1657 NA non-coding upstream 203758 4747595 ~ 4749363 (-)
G1666 LOC103369328 non-coding upstream 256039 4799876 ~ 4801970 (-)
G1675 NA non-coding upstream 264067 4807904 ~ 4815646 (-)
G1464 NA other downstream 194147 4345547 ~ 4346086 (-)
G1242 NA other downstream 867695 3648688 ~ 3672538 (-)
dpy30 NA other downstream 875844 3659840 ~ 3664389 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other downstream 891760 3494887 ~ 3648473 (-)
G1623 NA other upstream 97749 4641586 ~ 4788577 (-)
LOC120563598 NA other upstream 230980 4774817 ~ 4783916 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other upstream 532769 5076606 ~ 5085518 (-)
G1726 NA other upstream 553532 5097369 ~ 5097634 (-)
LOC120564103 NA other upstream 570183 5114020 ~ 5135305 (-)

Expression


Co-expression Network