LOC120568431


Basic Information

Item Value
gene id LOC120568431
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 25524855 ~ 25525679 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640729.1
GCAAGACTGTGGTGTGTGCTGGACGCTGCTGTTCTCTCTGTGTCCAGCTTTCGctgttctctcctctctcctctcaggTTTTCTGGTTTATCACCTCTGTCGGAAAAAAGCTAAAGAACCTGAAGCTGATCAGCAGAAACCTCAAACAAGACTGAATCAGGATGAAGATGTGTGTTATGCTGCAGTGGAAATCCGTCAAGCGTCACAGagaccaaagaagaagaaaacccaGAGTTCTGACTTCTGCACATATTCTGCCATCAATACATCGAGGATGTAGAGAGCTTAAAGAACAGAAAAGAACAAacattataaattatataatgATGATTAATGATGAAAGGTATAATTCATTTGGGATAAGTATAGACCATTCTGTTACTTATCGCAGGGTGTGATTTTCCGAGGGGATGCGTGGGATTTTTGCGAAGTGAACTCTTAACACTtatttttgagattattttccattgaatattgaagtgcataaatacgtgttttggcatggctggctgagtggcactatatccatAGTATTGAAAAGGGTAATTAattattgcatgttttattttgttgtgcccaatcaatcaaacttttttcacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640729.1 True 602 lncRNA 0.39 3 25524855 25525679

Neighbor

gene id symbol gene type direction distance location
LOC120547284 dctn6,LOC102799503 coding downstream 45145 25476830 ~ 25479710 (-)
smim18 smim18 coding downstream 54165 25467097 ~ 25470690 (-)
si:dkey-92j12.5 LOC104962067,LOC103353171 coding downstream 226295 25258657 ~ 25298560 (-)
ptprdb LOC103353169,LOC102314524,LOC102204731 coding downstream 353793 24994114 ~ 25171062 (-)
ecpas kiaa0368 coding downstream 566587 24932476 ~ 24958268 (-)
LOC120568214 NA coding upstream 51100 25576779 ~ 25581678 (-)
crmp1 LOC103353182,LOC102796940,LOC104957015,LOC102288736 coding upstream 271520 25797199 ~ 25808606 (-)
ppp2r2ca LOC103383728,LOC103353185,LOC100709897,LOC104957013,LOC101464647 coding upstream 295375 25821054 ~ 25829233 (-)
camk2d2 camk2d,LOC100698346,LOC102204310,LOC106958643,LOC103469495,LOC103354871,LOC108246882,LOC107382167,LOC106904815,LOC101466566,LOC103383722,LOC102794776 coding upstream 436048 25961727 ~ 26000026 (-)
LOC120560669 LOC103354873 coding upstream 475825 26001504 ~ 26003271 (-)
G7551 NA non-coding downstream 12502 25475443 ~ 25512353 (-)
G7506 LOC103353170,LOC104960336 non-coding downstream 270636 25253306 ~ 25254219 (-)
G7388 NA non-coding downstream 712771 24811462 ~ 24812084 (-)
G7383 pde6h,LOC101074909,LOC103354149,LOC106533555 non-coding downstream 761165 24761914 ~ 24763690 (-)
G7352 grin2b,LOC106927073,LOC103137761 non-coding downstream 872634 24651943 ~ 24652221 (-)
LOC120568384 NA non-coding upstream 20456 25546135 ~ 25549752 (-)
G7577 NA non-coding upstream 73019 25598698 ~ 25599084 (-)
G7599 LOC103353181,LOC102797720,LOC101487977 non-coding upstream 225491 25751170 ~ 25752341 (-)
G7600 LOC104957016,LOC106903860,LOC103469346,LOC102220538 non-coding upstream 231726 25757405 ~ 25758265 (-)
G7601 NA non-coding upstream 252978 25778657 ~ 25778944 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other downstream 765237 24755932 ~ 24759618 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other downstream 855558 24665385 ~ 24669297 (-)
G7323 NA other downstream 989539 24532236 ~ 24535316 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 1639093 23882745 ~ 23885762 (-)
palm3 NA other downstream 1713834 23772856 ~ 23811021 (-)
G7589 NA other upstream 172582 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 258265 25783944 ~ 25788229 (-)
G7722 LOC103354873 other upstream 475845 26001524 ~ 26009217 (-)
polq LOC104947247,LOC104947243,LOC106593755 other upstream 549718 26075397 ~ 26094244 (-)
adamtsl7 NA other upstream 586335 26112014 ~ 26121649 (-)

Expression


Co-expression Network