LOC120569580


Basic Information

Item Value
gene id LOC120569580
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22039009 ~ 22039151 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640901.1
GCAGCACACCATTAAAGCCTGGCACTGATCTCGTCTGTGTTTAGGTGTCGGAAGTGTGCCAGAGTGATTTGGCTGGGTTTTCGCTAACACCATTAGGACTGCTGTCCCATGACTGGGGTTTGATAGTGACCTGAGCCACATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640901.1 True 143 snoRNA 0.52 1 22039009 22039151

Neighbor

gene id symbol gene type direction distance location
ttc26 ttc26,LOC102798810 coding downstream 5801 22022244 ~ 22033208 (-)
LOC120558174 ubn2,LOC103364441 coding downstream 18574 22000268 ~ 22020435 (-)
cygb2 cygb,LOC104922950,LOC103373403 coding downstream 161751 21856670 ~ 21877258 (-)
LOC120557332 NA coding downstream 220566 21812708 ~ 21818443 (-)
LOC120567942 sphk1 coding downstream 246893 21755292 ~ 21792116 (-)
slc25a38b LOC103364442,LOC107382263,LOC108242715,LOC106515296,LOC105939773,LOC103153186,LOC101165446,LOC106917329 coding upstream 2574 22041725 ~ 22051538 (-)
LOC120565705 NA coding upstream 13859 22053010 ~ 22085472 (-)
map2k7 map2k7 coding upstream 56809 22095960 ~ 22111807 (-)
pkn1a pkn1,LOC103364445,LOC108242730,LOC107382353,LOC103383564 coding upstream 75965 22115116 ~ 22171674 (-)
si:ch211-214c7.4 LOC107102761 coding upstream 143532 22182683 ~ 22209730 (-)
G6654 NA non-coding downstream 61861 21968847 ~ 21977148 (-)
G6653 NA non-coding downstream 62768 21968004 ~ 21976241 (-)
G6618 NA non-coding downstream 191376 21835827 ~ 21847633 (-)
LOC120568701 NA non-coding downstream 227086 21811200 ~ 21811923 (-)
G6617 NA non-coding downstream 276703 21762097 ~ 21762306 (-)
G6731 NA non-coding upstream 51349 22090500 ~ 22091557 (-)
G6764 NA non-coding upstream 225233 22264384 ~ 22265992 (-)
G6762 ddx39a,LOC103150096 non-coding upstream 285399 22324550 ~ 22325383 (-)
LOC120562974 NA non-coding upstream 562237 22601388 ~ 22603953 (-)
G6834 NA non-coding upstream 612381 22651532 ~ 22653786 (-)
G6592 ube2o,LOC106534564 other downstream 329197 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 469950 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 1845671 20187281 ~ 20193338 (-)
spink4 NA other downstream 1994283 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 2242487 19766497 ~ 19796522 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 289368 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 626224 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 942774 22981925 ~ 22988500 (-)
G6924 NA other upstream 1049349 23088500 ~ 23164937 (-)
G6943 NA other upstream 1174705 23213856 ~ 23242290 (-)

Expression


Co-expression Network